Gene annotation
Transcriptome id Sobic.009G072900.3,Sobic.009G072900.2
Synonym Sb09g006130
Functional annotation calmodulin-binding protein, putative, expressed
UniProt A0A1B6P746 , C5YUE3
Pfam -
Panther DB PTHR31250 PTHR31250:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33050 : calmodulin-binding family protein
RAP-DB (Rice) LOC_Os05g10840.1,LOC_Os05g10840.2 : calmodulin-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a048872 , Zm00025a043166
Brachypodium KQK07113
Barley HORVU1Hr1G028900.12 , HORVU1Hr1G028900.13 , HORVU1Hr1G028900.10 , HORVU1Hr1G028900.11 , HORVU1Hr1G028900.14 , HORVU1Hr1G028900.1 , HORVU1Hr1G028900.2 , HORVU1Hr1G028900.3 , HORVU1Hr1G028900.4 , HORVU1Hr1G028900.5 , HORVU1Hr1G028900.6 , HORVU1Hr1G028900.7 , HORVU1Hr1G028900.8 , HORVU1Hr1G028900.9
Wheat TraesCS1A02G125400 , TraesCS3A02G206400 , TraesCS1D02G128400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G403000 expressed protein -
2 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.010G185000 VQ domain containing protein, putative, expressed -
4 Sobic.005G206601 - -
5 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
6 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
8 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
9 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
10 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.001G147900 cytochrome P450, putative, expressed -
12 Sobic.004G176600 no apical meristem protein, putative, expressed -
13 Sobic.003G404600 regulatory protein, putative, expressed -
14 Sobic.006G277550 - K00430: peroxidase
15 Sobic.003G368600 terpene synthase, putative, expressed -
16 Sobic.001G487300 expressed protein -
17 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
18 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
19 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
20 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G072900 Sobic009G072900 Sobic001G403000 Sobic001G403000 Sobic009G072900--Sobic001G403000 Sobic002G375400 Sobic002G375400 Sobic009G072900--Sobic002G375400 Sobic010G185000 Sobic010G185000 Sobic009G072900--Sobic010G185000 Sobic005G206601 Sobic005G206601 Sobic009G072900--Sobic005G206601 Sobic004G348400 Sobic004G348400 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic003G366600 Sobic003G366600 Sobic009G072900--Sobic003G366600 Sobic009G240600 Sobic009G240600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic001G487300 Sobic001G487300 Sobic001G403000--Sobic001G487300 Sobic001G403000--Sobic009G072900 Sobic008G063400 Sobic008G063400 Sobic001G403000--Sobic008G063400 Sobic003G437200 Sobic003G437200 Sobic001G403000--Sobic003G437200 Sobic001G403000--Sobic005G206601 Sobic001G403000--Sobic009G240600 Sobic001G403000--Sobic002G375400 Sobic003G417800 Sobic003G417800 Sobic001G403000--Sobic003G417800 Sobic001G403000--Sobic010G185000 Sobic004G176600 Sobic004G176600 Sobic002G375400--Sobic004G176600 Sobic004G107700 Sobic004G107700 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic002G375400--Sobic005G206601 Sobic002G375400--Sobic003G437200 Sobic002G375400--Sobic009G072900 Sobic002G375400--Sobic003G417800 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic003G117600 Sobic003G117600 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic003G011600 Sobic003G011600 Sobic004G348400--Sobic003G011600 Sobic004G348400--Sobic003G366600 Sobic003G368600 Sobic003G368600 Sobic004G348400--Sobic003G368600 Sobic004G348400--Sobic002G247600 Sobic004G348400--Sobic010G185000 Sobic004G348400--Sobic002G375400 Sobic004G348400--Sobic004G176600 Sobic006G044100 Sobic006G044100 Sobic004G348400--Sobic006G044100 Sobic004G348400--Sobic006G243600 Sobic006G243600--Sobic003G368600 Sobic006G243600--Sobic004G348400 Sobic006G243600--Sobic009G240600 Sobic006G243600--Sobic007G151300 Sobic006G243600--Sobic002G247600 Sobic006G243600--Sobic009G072900 Sobic001G147900 Sobic001G147900 Sobic006G243600--Sobic001G147900 Sobic006G243600--Sobic010G185000 Sobic010G008400 Sobic010G008400 Sobic006G243600--Sobic010G008400 Sobic003G366600--Sobic004G348400 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic003G366600--Sobic010G185000 Sobic003G404600 Sobic003G404600 Sobic003G366600--Sobic003G404600 Sobic003G366600--Sobic001G481400 Sobic003G366600--Sobic001G403000 Sobic003G366600--Sobic009G072900 Sobic006G059700 Sobic006G059700 Sobic003G366600--Sobic006G059700 Sobic009G240600--Sobic001G481400 Sobic009G240600--Sobic007G227300 Sobic001G231700 Sobic001G231700 Sobic009G240600--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic009G240600--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic009G240600--Sobic001G500000 Sobic002G287100 Sobic002G287100 Sobic009G240600--Sobic002G287100 Sobic001G476500 Sobic001G476500 Sobic009G240600--Sobic001G476500 Sobic009G240600--Sobic003G417800 Sobic001G192200 Sobic001G192200 Sobic009G240600--Sobic001G192200 Sobic007G067600 Sobic007G067600 Sobic003G430600--Sobic007G067600 Sobic003G430600--Sobic007G227300 Sobic003G426000 Sobic003G426000 Sobic003G430600--Sobic003G426000 Sobic010G084300 Sobic010G084300 Sobic003G430600--Sobic010G084300 Sobic007G066932 Sobic007G066932 Sobic003G430600--Sobic007G066932 Sobic002G195400 Sobic002G195400 Sobic003G430600--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic003G430600--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic003G430600--Sobic009G128700 Sobic003G430600--Sobic006G099900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.