Gene annotation
Transcriptome id Sobic.002G375400.5,Sobic.002G375400.4,Sobic.002G375400.6,Sobic.002G375400.1
Synonym ethylene response factor 31, RAP2.12, SbERF31, Sb02g039300
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5XE21
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF16
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G72360 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os07g42510.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047123
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G176600 no apical meristem protein, putative, expressed -
2 Sobic.004G107700 expressed protein -
3 Sobic.010G185000 VQ domain containing protein, putative, expressed -
4 Sobic.005G206601 - -
5 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
6 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
7 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
8 Sobic.001G403000 expressed protein -
9 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
10 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
11 Sobic.005G084600 ARGOS, putative, expressed -
12 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.007G215900 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
14 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.003G252800 hypothetical protein -
16 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
17 Sobic.003G255200 expressed protein -
18 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
19 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
20 Sobic.006G125100 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic002G375400 Sobic002G375400 Sobic004G176600 Sobic004G176600 Sobic002G375400--Sobic004G176600 Sobic004G107700 Sobic004G107700 Sobic002G375400--Sobic004G107700 Sobic010G185000 Sobic010G185000 Sobic002G375400--Sobic010G185000 Sobic005G206601 Sobic005G206601 Sobic002G375400--Sobic005G206601 Sobic003G437200 Sobic003G437200 Sobic002G375400--Sobic003G437200 Sobic009G072900 Sobic009G072900 Sobic002G375400--Sobic009G072900 Sobic003G417800 Sobic003G417800 Sobic002G375400--Sobic003G417800 Sobic001G403000 Sobic001G403000 Sobic002G375400--Sobic001G403000 Sobic004G348400 Sobic004G348400 Sobic002G375400--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic004G176600--Sobic006G044100 Sobic004G176600--Sobic002G375400 Sobic004G176600--Sobic004G107700 Sobic005G084600 Sobic005G084600 Sobic004G176600--Sobic005G084600 Sobic003G255200 Sobic003G255200 Sobic004G176600--Sobic003G255200 Sobic004G176600--Sobic003G437200 Sobic004G176600--Sobic003G417800 Sobic004G176600--Sobic010G185000 Sobic004G176600--Sobic004G348400 Sobic004G107700--Sobic003G255200 Sobic004G107700--Sobic003G437200 Sobic002G125700 Sobic002G125700 Sobic004G107700--Sobic002G125700 Sobic004G107700--Sobic003G417800 Sobic001G503100 Sobic001G503100 Sobic004G107700--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic004G107700--Sobic002G034800 Sobic009G139400 Sobic009G139400 Sobic004G107700--Sobic009G139400 Sobic003G352300 Sobic003G352300 Sobic004G107700--Sobic003G352300 Sobic004G107700--Sobic004G176600 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic003G117600 Sobic003G117600 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic003G437200--Sobic004G107700 Sobic003G437200--Sobic003G417800 Sobic006G084600 Sobic006G084600 Sobic003G437200--Sobic006G084600 Sobic003G062600 Sobic003G062600 Sobic003G437200--Sobic003G062600 Sobic003G437200--Sobic001G403000 Sobic007G155100 Sobic007G155100 Sobic003G437200--Sobic007G155100 Sobic001G119400 Sobic001G119400 Sobic003G437200--Sobic001G119400 Sobic003G437200--Sobic004G176600 Sobic003G437200--Sobic002G375400 Sobic009G072900--Sobic001G403000 Sobic009G072900--Sobic002G375400 Sobic009G072900--Sobic010G185000 Sobic009G072900--Sobic005G206601 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic003G366600 Sobic003G366600 Sobic009G072900--Sobic003G366600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic001G476500 Sobic001G476500 Sobic003G417800--Sobic001G476500 Sobic003G417800--Sobic003G437200 Sobic009G183400 Sobic009G183400 Sobic003G417800--Sobic009G183400 Sobic003G417800--Sobic003G062600 Sobic003G417800--Sobic001G119400 Sobic003G417800--Sobic004G107700 Sobic003G417800--Sobic006G099900 Sobic003G417800--Sobic003G352300 Sobic003G417800--Sobic009G240600 Sobic001G487300 Sobic001G487300 Sobic001G403000--Sobic001G487300 Sobic001G403000--Sobic009G072900 Sobic008G063400 Sobic008G063400 Sobic001G403000--Sobic008G063400 Sobic001G403000--Sobic003G437200 Sobic001G403000--Sobic005G206601 Sobic001G403000--Sobic009G240600 Sobic001G403000--Sobic002G375400 Sobic001G403000--Sobic003G417800 Sobic001G403000--Sobic010G185000 Sobic003G011600 Sobic003G011600 Sobic004G348400--Sobic003G011600 Sobic004G348400--Sobic003G366600 Sobic003G368600 Sobic003G368600 Sobic004G348400--Sobic003G368600 Sobic004G348400--Sobic002G247600 Sobic004G348400--Sobic010G185000 Sobic004G348400--Sobic002G375400 Sobic004G348400--Sobic004G176600 Sobic004G348400--Sobic006G044100 Sobic004G348400--Sobic006G243600
Octagon: transcription factors


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