Gene annotation
Transcriptome id Sobic.002G247600.1
Synonym Sb02g028400, BGLU17
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed
UniProt C5X3X5
Pfam PF00232
Panther DB PTHR10353 PTHR10353:SF48
NCBI CDD -
KEGG Orthology K01188; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G44480 : beta glucosidase 17
RAP-DB (Rice) LOC_Os09g31430.1 : Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed
MaizeGDB (Corn) -
Brachypodium KQJ98924
Barley -
Wheat TraesCS5D02G273700
Populus -


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cDNA sequences
Sobic.002G247600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G462700 expressed protein -
2 Sobic.010G185000 VQ domain containing protein, putative, expressed -
3 Sobic.009G003600 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
4 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
5 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
6 Sobic.001G333400 SCP-like extracellular protein, expressed -
7 Sobic.007G151300 Cupin domain containing protein, expressed -
8 Sobic.005G206601 - -
9 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
10 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.006G125100 ubiquitin family protein, putative, expressed -
12 Sobic.006G268800 transporter family protein, putative, expressed -
13 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
15 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.002G017800 expressed protein -
17 Sobic.003G007600 expressed protein -
18 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.004G148200 Cupin domain containing protein, expressed -
20 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase


Gene co-expression network
sample Sobic002G247600 Sobic002G247600 Sobic001G462700 Sobic001G462700 Sobic002G247600--Sobic001G462700 Sobic010G185000 Sobic010G185000 Sobic002G247600--Sobic010G185000 Sobic009G003600 Sobic009G003600 Sobic002G247600--Sobic009G003600 Sobic004G348400 Sobic004G348400 Sobic002G247600--Sobic004G348400 Sobic001G331200 Sobic001G331200 Sobic002G247600--Sobic001G331200 Sobic001G333400 Sobic001G333400 Sobic002G247600--Sobic001G333400 Sobic007G151300 Sobic007G151300 Sobic002G247600--Sobic007G151300 Sobic005G206601 Sobic005G206601 Sobic002G247600--Sobic005G206601 Sobic003G117600 Sobic003G117600 Sobic002G247600--Sobic003G117600 Sobic001G462700--Sobic002G247600 Sobic001G325400 Sobic001G325400 Sobic001G462700--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic001G462700--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G462700--Sobic009G111000 Sobic007G204700 Sobic007G204700 Sobic001G462700--Sobic007G204700 Sobic001G462700--Sobic003G117600 Sobic010G008400 Sobic010G008400 Sobic001G462700--Sobic010G008400 Sobic001G462700--Sobic001G331200 Sobic004G046200 Sobic004G046200 Sobic001G462700--Sobic004G046200 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic010G185000--Sobic007G151300 Sobic009G003600--Sobic002G247600 Sobic009G003600--Sobic010G185000 Sobic001G400800 Sobic001G400800 Sobic009G003600--Sobic001G400800 Sobic009G003600--Sobic007G227300 Sobic006G268800 Sobic006G268800 Sobic009G003600--Sobic006G268800 Sobic006G103000 Sobic006G103000 Sobic009G003600--Sobic006G103000 Sobic009G003600--Sobic004G348400 Sobic003G366600 Sobic003G366600 Sobic009G003600--Sobic003G366600 Sobic009G003600--Sobic001G333400 Sobic003G011600 Sobic003G011600 Sobic004G348400--Sobic003G011600 Sobic004G348400--Sobic003G366600 Sobic003G368600 Sobic003G368600 Sobic004G348400--Sobic003G368600 Sobic004G348400--Sobic002G247600 Sobic004G348400--Sobic010G185000 Sobic004G348400--Sobic002G375400 Sobic004G176600 Sobic004G176600 Sobic004G348400--Sobic004G176600 Sobic006G044100 Sobic006G044100 Sobic004G348400--Sobic006G044100 Sobic006G243600 Sobic006G243600 Sobic004G348400--Sobic006G243600 Sobic004G148200 Sobic004G148200 Sobic001G331200--Sobic004G148200 Sobic001G331200--Sobic006G268800 Sobic002G017800 Sobic002G017800 Sobic001G331200--Sobic002G017800 Sobic001G331200--Sobic007G227300 Sobic001G331200--Sobic002G247600 Sobic001G331200--Sobic006G103000 Sobic001G331200--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic001G331200--Sobic001G318500 Sobic005G091500 Sobic005G091500 Sobic001G331200--Sobic005G091500 Sobic005G011200 Sobic005G011200 Sobic001G333400--Sobic005G011200 Sobic010G052700 Sobic010G052700 Sobic001G333400--Sobic010G052700 Sobic001G333400--Sobic002G247600 Sobic007G141500 Sobic007G141500 Sobic001G333400--Sobic007G141500 Sobic001G503100 Sobic001G503100 Sobic001G333400--Sobic001G503100 Sobic002G004900 Sobic002G004900 Sobic001G333400--Sobic002G004900 Sobic006G125100 Sobic006G125100 Sobic001G333400--Sobic006G125100 Sobic002G336700 Sobic002G336700 Sobic001G333400--Sobic002G336700 Sobic001G187200 Sobic001G187200 Sobic001G333400--Sobic001G187200 Sobic010G270500 Sobic010G270500 Sobic007G151300--Sobic010G270500 Sobic007G151300--Sobic002G247600 Sobic007G151300--Sobic010G185000 Sobic003G007600 Sobic003G007600 Sobic007G151300--Sobic003G007600 Sobic007G151300--Sobic006G243600 Sobic001G050100 Sobic001G050100 Sobic007G151300--Sobic001G050100 Sobic004G159733 Sobic004G159733 Sobic007G151300--Sobic004G159733 Sobic007G151300--Sobic002G017800 Sobic007G151300--Sobic001G462700 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic005G206601--Sobic001G400800 Sobic003G117600--Sobic006G277600 Sobic003G117600--Sobic007G141500 Sobic005G063100 Sobic005G063100 Sobic003G117600--Sobic005G063100 Sobic006G092500 Sobic006G092500 Sobic003G117600--Sobic006G092500 Sobic003G117600--Sobic005G206601 Sobic006G153100 Sobic006G153100 Sobic003G117600--Sobic006G153100 Sobic003G117600--Sobic001G325400 Sobic002G354100 Sobic002G354100 Sobic003G117600--Sobic002G354100 Sobic003G117600--Sobic005G091500
Octagon: transcription factors


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