Gene annotation
Transcriptome id Sobic.007G151300.1
Synonym GLP1, ATGER1, GER1, Sb07g022520
Functional annotation Cupin domain containing protein, expressed
UniProt C5YM54
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72610 : germin-like protein 1
RAP-DB (Rice) LOC_Os04g22080.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQJ98565 , PNT68238
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
3 Sobic.010G185000 VQ domain containing protein, putative, expressed -
4 Sobic.003G007600 expressed protein -
5 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G050100 Cupin domain containing protein, expressed -
7 Sobic.004G159733 - -
8 Sobic.002G017800 expressed protein -
9 Sobic.001G462700 expressed protein -
10 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.006G157900 C2 domain containing protein, putative, expressed -
13 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
14 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
15 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G299300 expressed protein -
17 Sobic.005G206601 - -
18 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
19 Sobic.009G003600 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.006G125100 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic007G151300 Sobic007G151300 Sobic010G270500 Sobic010G270500 Sobic007G151300--Sobic010G270500 Sobic002G247600 Sobic002G247600 Sobic007G151300--Sobic002G247600 Sobic010G185000 Sobic010G185000 Sobic007G151300--Sobic010G185000 Sobic003G007600 Sobic003G007600 Sobic007G151300--Sobic003G007600 Sobic006G243600 Sobic006G243600 Sobic007G151300--Sobic006G243600 Sobic001G050100 Sobic001G050100 Sobic007G151300--Sobic001G050100 Sobic004G159733 Sobic004G159733 Sobic007G151300--Sobic004G159733 Sobic002G017800 Sobic002G017800 Sobic007G151300--Sobic002G017800 Sobic001G462700 Sobic001G462700 Sobic007G151300--Sobic001G462700 Sobic010G270500--Sobic003G007600 Sobic010G270500--Sobic007G151300 Sobic003G299300 Sobic003G299300 Sobic010G270500--Sobic003G299300 Sobic001G304100 Sobic001G304100 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G270500--Sobic009G111000 Sobic005G018700 Sobic005G018700 Sobic010G270500--Sobic005G018700 Sobic006G103000 Sobic006G103000 Sobic010G270500--Sobic006G103000 Sobic010G270500--Sobic001G050100 Sobic002G247600--Sobic001G462700 Sobic002G247600--Sobic010G185000 Sobic009G003600 Sobic009G003600 Sobic002G247600--Sobic009G003600 Sobic004G348400 Sobic004G348400 Sobic002G247600--Sobic004G348400 Sobic001G331200 Sobic001G331200 Sobic002G247600--Sobic001G331200 Sobic001G333400 Sobic001G333400 Sobic002G247600--Sobic001G333400 Sobic002G247600--Sobic007G151300 Sobic005G206601 Sobic005G206601 Sobic002G247600--Sobic005G206601 Sobic003G117600 Sobic003G117600 Sobic002G247600--Sobic003G117600 Sobic010G185000--Sobic002G247600 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic010G185000--Sobic007G151300 Sobic003G007600--Sobic003G299300 Sobic001G238400 Sobic001G238400 Sobic003G007600--Sobic001G238400 Sobic003G007600--Sobic010G270500 Sobic003G007600--Sobic006G103000 Sobic003G007600--Sobic001G304100 Sobic003G007600--Sobic002G017800 Sobic003G007600--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic003G007600--Sobic001G318500 Sobic001G402200 Sobic001G402200 Sobic003G007600--Sobic001G402200 Sobic003G368600 Sobic003G368600 Sobic006G243600--Sobic003G368600 Sobic006G243600--Sobic004G348400 Sobic006G243600--Sobic009G240600 Sobic006G243600--Sobic007G151300 Sobic006G243600--Sobic002G247600 Sobic009G072900 Sobic009G072900 Sobic006G243600--Sobic009G072900 Sobic001G147900 Sobic001G147900 Sobic006G243600--Sobic001G147900 Sobic006G243600--Sobic010G185000 Sobic010G008400 Sobic010G008400 Sobic006G243600--Sobic010G008400 Sobic005G063100 Sobic005G063100 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G050100--Sobic002G140400 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic001G050100--Sobic006G103000 Sobic001G192200 Sobic001G192200 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic010G176600 Sobic010G176600 Sobic001G050100--Sobic010G176600 Sobic004G159733--Sobic005G018700 Sobic004G159733--Sobic010G270500 Sobic004G159733--Sobic007G151300 Sobic004G159733--Sobic001G050100 Sobic002G336700 Sobic002G336700 Sobic004G159733--Sobic002G336700 Sobic004G159733--Sobic010G185000 Sobic004G159733--Sobic006G103000 Sobic004G159733--Sobic003G007600 Sobic004G159733--Sobic003G299300 Sobic002G017800--Sobic001G367600 Sobic002G017800--Sobic009G111000 Sobic002G017800--Sobic001G318500 Sobic002G017800--Sobic005G018700 Sobic009G077800 Sobic009G077800 Sobic002G017800--Sobic009G077800 Sobic002G055700 Sobic002G055700 Sobic002G017800--Sobic002G055700 Sobic001G325400 Sobic001G325400 Sobic002G017800--Sobic001G325400 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic001G462700--Sobic002G247600 Sobic001G462700--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic001G462700--Sobic006G039100 Sobic001G462700--Sobic009G111000 Sobic007G204700 Sobic007G204700 Sobic001G462700--Sobic007G204700 Sobic001G462700--Sobic003G117600 Sobic001G462700--Sobic010G008400 Sobic001G462700--Sobic001G331200 Sobic004G046200 Sobic004G046200 Sobic001G462700--Sobic004G046200
Octagon: transcription factors


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