Gene annotation
Transcriptome id Sobic.003G299300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q648
Pfam -
Panther DB PTHR33869 PTHR33869:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g55080.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G007600 expressed protein -
2 Sobic.008G009400 - -
3 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
6 Sobic.001G238400 expansin precursor, putative, expressed -
7 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
9 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.002G351300 expressed protein -
11 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
13 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
14 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.001G237900 expansin precursor, putative, expressed -
17 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
18 Sobic.006G235200 expressed protein -
19 Sobic.002G176100 membrane protein, putative, expressed -
20 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G299300 Sobic003G299300 Sobic003G007600 Sobic003G007600 Sobic003G299300--Sobic003G007600 Sobic008G009400 Sobic008G009400 Sobic003G299300--Sobic008G009400 Sobic001G330300 Sobic001G330300 Sobic003G299300--Sobic001G330300 Sobic010G270500 Sobic010G270500 Sobic003G299300--Sobic010G270500 Sobic009G188000 Sobic009G188000 Sobic003G299300--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic003G299300--Sobic001G238400 Sobic001G304100 Sobic001G304100 Sobic003G299300--Sobic001G304100 Sobic004G295100 Sobic004G295100 Sobic003G299300--Sobic004G295100 Sobic006G103000 Sobic006G103000 Sobic003G299300--Sobic006G103000 Sobic003G007600--Sobic003G299300 Sobic003G007600--Sobic001G238400 Sobic003G007600--Sobic010G270500 Sobic003G007600--Sobic006G103000 Sobic003G007600--Sobic001G304100 Sobic002G017800 Sobic002G017800 Sobic003G007600--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic003G007600--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic003G007600--Sobic001G318500 Sobic001G402200 Sobic001G402200 Sobic003G007600--Sobic001G402200 Sobic004G297900 Sobic004G297900 Sobic008G009400--Sobic004G297900 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic008G009400--Sobic003G299300 Sobic010G270700 Sobic010G270700 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic008G009400--Sobic009G188000 Sobic006G235200 Sobic006G235200 Sobic008G009400--Sobic006G235200 Sobic008G009400--Sobic001G330300 Sobic001G330300--Sobic003G299300 Sobic001G330300--Sobic004G295100 Sobic001G330300--Sobic008G009400 Sobic006G050800 Sobic006G050800 Sobic001G330300--Sobic006G050800 Sobic001G330300--Sobic010G270700 Sobic001G330300--Sobic004G141100 Sobic010G196000 Sobic010G196000 Sobic001G330300--Sobic010G196000 Sobic001G242000 Sobic001G242000 Sobic001G330300--Sobic001G242000 Sobic003G282100 Sobic003G282100 Sobic001G330300--Sobic003G282100 Sobic010G270500--Sobic003G007600 Sobic007G151300 Sobic007G151300 Sobic010G270500--Sobic007G151300 Sobic010G270500--Sobic003G299300 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic010G270500--Sobic009G111000 Sobic005G018700 Sobic005G018700 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic001G050100 Sobic001G050100 Sobic010G270500--Sobic001G050100 Sobic001G313600 Sobic001G313600 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic003G084400 Sobic003G084400 Sobic009G188000--Sobic003G084400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic001G238400--Sobic001G304100 Sobic001G237900 Sobic001G237900 Sobic001G238400--Sobic001G237900 Sobic001G238400--Sobic003G007600 Sobic001G238400--Sobic009G188000 Sobic004G318700 Sobic004G318700 Sobic001G238400--Sobic004G318700 Sobic001G238400--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G238400--Sobic004G292900 Sobic006G234800 Sobic006G234800 Sobic001G238400--Sobic006G234800 Sobic006G132900 Sobic006G132900 Sobic001G238400--Sobic006G132900 Sobic001G304100--Sobic009G188000 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic001G304100--Sobic006G234800 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic004G295100--Sobic008G009400 Sobic006G202600 Sobic006G202600 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic007G090469 Sobic007G090469 Sobic004G295100--Sobic007G090469 Sobic006G103000--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic006G103000--Sobic006G268800 Sobic001G231700 Sobic001G231700 Sobic006G103000--Sobic001G231700 Sobic001G367600 Sobic001G367600 Sobic006G103000--Sobic001G367600 Sobic009G240600 Sobic009G240600 Sobic006G103000--Sobic009G240600 Sobic010G211900 Sobic010G211900 Sobic006G103000--Sobic010G211900 Sobic006G103000--Sobic003G007600 Sobic007G227300 Sobic007G227300 Sobic006G103000--Sobic007G227300 Sobic001G500000 Sobic001G500000 Sobic006G103000--Sobic001G500000
Octagon: transcription factors


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