Gene annotation
Transcriptome id Sobic.004G159733.1
Synonym -
Functional annotation -
UniProt A0A1Z5RMP9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g32009.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ99648
Barley HORVU7Hr1G115670.3 , HORVU7Hr1G115670.2 , HORVU7Hr1G115670.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
2 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.007G151300 Cupin domain containing protein, expressed -
4 Sobic.001G050100 Cupin domain containing protein, expressed -
5 Sobic.002G336700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
6 Sobic.010G185000 VQ domain containing protein, putative, expressed -
7 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G007600 expressed protein -
9 Sobic.003G299300 expressed protein -
10 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
11 Sobic.010G001000 expressed protein -
12 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
13 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
14 Sobic.002G017800 expressed protein -
15 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.001G471200 membrane protein, putative, expressed -
17 Sobic.006G157900 C2 domain containing protein, putative, expressed -
18 Sobic.003G192100 expressed protein -
19 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.003G319500 receptor protein kinase, putative, expressed -


Gene co-expression network
sample Sobic004G159733 Sobic004G159733 Sobic005G018700 Sobic005G018700 Sobic004G159733--Sobic005G018700 Sobic010G270500 Sobic010G270500 Sobic004G159733--Sobic010G270500 Sobic007G151300 Sobic007G151300 Sobic004G159733--Sobic007G151300 Sobic001G050100 Sobic001G050100 Sobic004G159733--Sobic001G050100 Sobic002G336700 Sobic002G336700 Sobic004G159733--Sobic002G336700 Sobic010G185000 Sobic010G185000 Sobic004G159733--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic004G159733--Sobic006G103000 Sobic003G007600 Sobic003G007600 Sobic004G159733--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic004G159733--Sobic003G299300 Sobic002G245100 Sobic002G245100 Sobic005G018700--Sobic002G245100 Sobic002G017800 Sobic002G017800 Sobic005G018700--Sobic002G017800 Sobic005G018700--Sobic006G103000 Sobic005G018700--Sobic010G185000 Sobic003G429000 Sobic003G429000 Sobic005G018700--Sobic003G429000 Sobic003G037800 Sobic003G037800 Sobic005G018700--Sobic003G037800 Sobic004G340900 Sobic004G340900 Sobic005G018700--Sobic004G340900 Sobic005G018700--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic005G018700--Sobic003G192100 Sobic010G270500--Sobic003G007600 Sobic010G270500--Sobic007G151300 Sobic010G270500--Sobic003G299300 Sobic001G304100 Sobic001G304100 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G270500--Sobic009G111000 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic010G270500--Sobic001G050100 Sobic007G151300--Sobic010G270500 Sobic002G247600 Sobic002G247600 Sobic007G151300--Sobic002G247600 Sobic007G151300--Sobic010G185000 Sobic007G151300--Sobic003G007600 Sobic006G243600 Sobic006G243600 Sobic007G151300--Sobic006G243600 Sobic007G151300--Sobic001G050100 Sobic007G151300--Sobic004G159733 Sobic007G151300--Sobic002G017800 Sobic001G462700 Sobic001G462700 Sobic007G151300--Sobic001G462700 Sobic005G063100 Sobic005G063100 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G050100--Sobic002G140400 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic001G050100--Sobic006G103000 Sobic001G192200 Sobic001G192200 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic010G176600 Sobic010G176600 Sobic001G050100--Sobic010G176600 Sobic002G336700--Sobic003G007600 Sobic002G336700--Sobic006G103000 Sobic002G336700--Sobic010G185000 Sobic005G011200 Sobic005G011200 Sobic002G336700--Sobic005G011200 Sobic006G157900 Sobic006G157900 Sobic002G336700--Sobic006G157900 Sobic001G333400 Sobic001G333400 Sobic002G336700--Sobic001G333400 Sobic001G231700 Sobic001G231700 Sobic002G336700--Sobic001G231700 Sobic001G402200 Sobic001G402200 Sobic002G336700--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic002G336700--Sobic006G268800 Sobic010G185000--Sobic002G247600 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic004G348400 Sobic004G348400 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic005G206601 Sobic005G206601 Sobic010G185000--Sobic005G206601 Sobic010G185000--Sobic007G151300 Sobic006G103000--Sobic001G402200 Sobic006G103000--Sobic006G268800 Sobic006G103000--Sobic001G231700 Sobic006G103000--Sobic001G367600 Sobic006G103000--Sobic009G240600 Sobic010G211900 Sobic010G211900 Sobic006G103000--Sobic010G211900 Sobic006G103000--Sobic003G007600 Sobic006G103000--Sobic007G227300 Sobic001G500000 Sobic001G500000 Sobic006G103000--Sobic001G500000 Sobic003G007600--Sobic003G299300 Sobic001G238400 Sobic001G238400 Sobic003G007600--Sobic001G238400 Sobic003G007600--Sobic010G270500 Sobic003G007600--Sobic006G103000 Sobic003G007600--Sobic001G304100 Sobic003G007600--Sobic002G017800 Sobic003G007600--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic003G007600--Sobic001G318500 Sobic003G007600--Sobic001G402200 Sobic003G299300--Sobic003G007600 Sobic008G009400 Sobic008G009400 Sobic003G299300--Sobic008G009400 Sobic001G330300 Sobic001G330300 Sobic003G299300--Sobic001G330300 Sobic003G299300--Sobic010G270500 Sobic009G188000 Sobic009G188000 Sobic003G299300--Sobic009G188000 Sobic003G299300--Sobic001G238400 Sobic003G299300--Sobic001G304100 Sobic004G295100 Sobic004G295100 Sobic003G299300--Sobic004G295100 Sobic003G299300--Sobic006G103000
Octagon: transcription factors


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