Gene annotation
Transcriptome id Sobic.006G157900.1
Synonym Sb06g023480
Functional annotation C2 domain containing protein, putative, expressed
UniProt C5YCV8
Pfam PF00168
Panther DB PTHR10774
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G63220 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os04g44870.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a032118 , Zm00025a010454
Brachypodium KQJ83739 , KQJ83738 , KQJ83740
Barley HORVU2Hr1G091320.1 , HORVU2Hr1G091320.8 , HORVU2Hr1G091320.3 , HORVU2Hr1G091320.2 , HORVU2Hr1G091320.7 , HORVU2Hr1G091320.6 , HORVU2Hr1G091320.5 , HORVU2Hr1G091320.4
Wheat TraesCS6A02G236000 , TraesCS6B02G264600 , TraesCS2D02G368300 , TraesCS2A02G372000 , TraesCS2A02G372000 , TraesCS2A02G372000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G001000 expressed protein -
2 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
3 Sobic.003G007600 expressed protein -
4 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
6 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
8 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.002G336700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
10 Sobic.001G328800 expressed protein -
11 Sobic.004G349125 - -
12 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
14 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
15 Sobic.001G300500 expansin precursor, putative, expressed -
16 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
17 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
18 Sobic.010G185000 VQ domain containing protein, putative, expressed -
19 Sobic.003G299300 expressed protein -
20 Sobic.006G197100 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G157900 Sobic006G157900 Sobic010G001000 Sobic010G001000 Sobic006G157900--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G157900--Sobic003G366600 Sobic003G007600 Sobic003G007600 Sobic006G157900--Sobic003G007600 Sobic006G103000 Sobic006G103000 Sobic006G157900--Sobic006G103000 Sobic003G311800 Sobic003G311800 Sobic006G157900--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic006G157900--Sobic001G302600 Sobic004G202400 Sobic004G202400 Sobic006G157900--Sobic004G202400 Sobic010G270500 Sobic010G270500 Sobic006G157900--Sobic010G270500 Sobic002G336700 Sobic002G336700 Sobic006G157900--Sobic002G336700 Sobic004G042000 Sobic004G042000 Sobic010G001000--Sobic004G042000 Sobic010G001000--Sobic006G157900 Sobic010G063000 Sobic010G063000 Sobic010G001000--Sobic010G063000 Sobic010G001000--Sobic001G302600 Sobic001G500000 Sobic001G500000 Sobic010G001000--Sobic001G500000 Sobic010G185000 Sobic010G185000 Sobic010G001000--Sobic010G185000 Sobic010G001000--Sobic006G103000 Sobic001G318500 Sobic001G318500 Sobic010G001000--Sobic001G318500 Sobic006G059700 Sobic006G059700 Sobic010G001000--Sobic006G059700 Sobic004G348400 Sobic004G348400 Sobic003G366600--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic003G366600--Sobic006G044100 Sobic003G366600--Sobic006G157900 Sobic003G366600--Sobic010G185000 Sobic003G404600 Sobic003G404600 Sobic003G366600--Sobic003G404600 Sobic001G481400 Sobic001G481400 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic009G072900 Sobic009G072900 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700 Sobic003G299300 Sobic003G299300 Sobic003G007600--Sobic003G299300 Sobic001G238400 Sobic001G238400 Sobic003G007600--Sobic001G238400 Sobic003G007600--Sobic010G270500 Sobic003G007600--Sobic006G103000 Sobic001G304100 Sobic001G304100 Sobic003G007600--Sobic001G304100 Sobic002G017800 Sobic002G017800 Sobic003G007600--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic003G007600--Sobic009G111000 Sobic003G007600--Sobic001G318500 Sobic001G402200 Sobic001G402200 Sobic003G007600--Sobic001G402200 Sobic006G103000--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic006G103000--Sobic006G268800 Sobic001G231700 Sobic001G231700 Sobic006G103000--Sobic001G231700 Sobic001G367600 Sobic001G367600 Sobic006G103000--Sobic001G367600 Sobic009G240600 Sobic009G240600 Sobic006G103000--Sobic009G240600 Sobic010G211900 Sobic010G211900 Sobic006G103000--Sobic010G211900 Sobic006G103000--Sobic003G007600 Sobic007G227300 Sobic007G227300 Sobic006G103000--Sobic007G227300 Sobic006G103000--Sobic001G500000 Sobic004G297900 Sobic004G297900 Sobic003G311800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000 Sobic001G416200 Sobic001G416200 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic004G349125 Sobic004G349125 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G161500 Sobic001G161500 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G304201 Sobic001G304201 Sobic001G302600--Sobic001G304201 Sobic004G292900 Sobic004G292900 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic001G237900 Sobic001G237900 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic004G202400--Sobic003G311800 Sobic010G270500--Sobic003G007600 Sobic007G151300 Sobic007G151300 Sobic010G270500--Sobic007G151300 Sobic010G270500--Sobic003G299300 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic010G270500--Sobic009G111000 Sobic005G018700 Sobic005G018700 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic001G050100 Sobic001G050100 Sobic010G270500--Sobic001G050100 Sobic002G336700--Sobic003G007600 Sobic002G336700--Sobic006G103000 Sobic002G336700--Sobic010G185000 Sobic005G011200 Sobic005G011200 Sobic002G336700--Sobic005G011200 Sobic002G336700--Sobic006G157900 Sobic001G333400 Sobic001G333400 Sobic002G336700--Sobic001G333400 Sobic002G336700--Sobic001G231700 Sobic002G336700--Sobic001G402200 Sobic002G336700--Sobic006G268800
Octagon: transcription factors


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