Gene annotation
Transcriptome id Sobic.001G328800.1
Synonym Sb01g031800
Functional annotation expressed protein
UniProt C5WVK9
Pfam -
Panther DB PTHR33167 PTHR33167:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67390 : -
RAP-DB (Rice) LOC_Os03g32790.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G157900 C2 domain containing protein, putative, expressed -
2 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
4 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
5 Sobic.004G262200 DNA binding protein, putative, expressed -
6 Sobic.003G007600 expressed protein -
7 Sobic.003G299300 expressed protein -
8 Sobic.006G235200 expressed protein -
9 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.008G009400 - -
11 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
12 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
14 Sobic.010G001000 expressed protein -
15 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.009G109000 expressed protein -
18 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
19 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
20 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic001G328800 Sobic001G328800 Sobic006G157900 Sobic006G157900 Sobic001G328800--Sobic006G157900 Sobic010G270500 Sobic010G270500 Sobic001G328800--Sobic010G270500 Sobic006G260200 Sobic006G260200 Sobic001G328800--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic001G328800--Sobic003G311800 Sobic004G262200 Sobic004G262200 Sobic001G328800--Sobic004G262200 Sobic003G007600 Sobic003G007600 Sobic001G328800--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic001G328800--Sobic003G299300 Sobic006G235200 Sobic006G235200 Sobic001G328800--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic001G328800--Sobic010G270700 Sobic010G001000 Sobic010G001000 Sobic006G157900--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G157900--Sobic003G366600 Sobic006G157900--Sobic003G007600 Sobic006G103000 Sobic006G103000 Sobic006G157900--Sobic006G103000 Sobic006G157900--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic006G157900--Sobic001G302600 Sobic004G202400 Sobic004G202400 Sobic006G157900--Sobic004G202400 Sobic006G157900--Sobic010G270500 Sobic002G336700 Sobic002G336700 Sobic006G157900--Sobic002G336700 Sobic010G270500--Sobic003G007600 Sobic007G151300 Sobic007G151300 Sobic010G270500--Sobic007G151300 Sobic010G270500--Sobic003G299300 Sobic001G304100 Sobic001G304100 Sobic010G270500--Sobic001G304100 Sobic002G017800 Sobic002G017800 Sobic010G270500--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G270500--Sobic009G111000 Sobic005G018700 Sobic005G018700 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic001G050100 Sobic001G050100 Sobic010G270500--Sobic001G050100 Sobic001G238300 Sobic001G238300 Sobic006G260200--Sobic001G238300 Sobic002G425000 Sobic002G425000 Sobic006G260200--Sobic002G425000 Sobic002G261500 Sobic002G261500 Sobic006G260200--Sobic002G261500 Sobic004G297900 Sobic004G297900 Sobic006G260200--Sobic004G297900 Sobic006G122800 Sobic006G122800 Sobic006G260200--Sobic006G122800 Sobic007G090469 Sobic007G090469 Sobic006G260200--Sobic007G090469 Sobic006G260200--Sobic004G202400 Sobic002G042200 Sobic002G042200 Sobic006G260200--Sobic002G042200 Sobic001G237900 Sobic001G237900 Sobic006G260200--Sobic001G237900 Sobic003G311800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic003G311800--Sobic007G090469 Sobic004G042000 Sobic004G042000 Sobic003G311800--Sobic004G042000 Sobic003G371750 Sobic003G371750 Sobic004G262200--Sobic003G371750 Sobic006G059700 Sobic006G059700 Sobic004G262200--Sobic006G059700 Sobic004G262200--Sobic001G328800 Sobic003G280400 Sobic003G280400 Sobic004G262200--Sobic003G280400 Sobic004G262200--Sobic006G197100 Sobic004G262200--Sobic004G042000 Sobic004G262200--Sobic006G260200 Sobic009G221500 Sobic009G221500 Sobic004G262200--Sobic009G221500 Sobic003G404600 Sobic003G404600 Sobic004G262200--Sobic003G404600 Sobic003G007600--Sobic003G299300 Sobic001G238400 Sobic001G238400 Sobic003G007600--Sobic001G238400 Sobic003G007600--Sobic010G270500 Sobic003G007600--Sobic006G103000 Sobic003G007600--Sobic001G304100 Sobic003G007600--Sobic002G017800 Sobic003G007600--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic003G007600--Sobic001G318500 Sobic001G402200 Sobic001G402200 Sobic003G007600--Sobic001G402200 Sobic003G299300--Sobic003G007600 Sobic008G009400 Sobic008G009400 Sobic003G299300--Sobic008G009400 Sobic001G330300 Sobic001G330300 Sobic003G299300--Sobic001G330300 Sobic003G299300--Sobic010G270500 Sobic009G188000 Sobic009G188000 Sobic003G299300--Sobic009G188000 Sobic003G299300--Sobic001G238400 Sobic003G299300--Sobic001G304100 Sobic004G295100 Sobic004G295100 Sobic003G299300--Sobic004G295100 Sobic003G299300--Sobic006G103000 Sobic006G235200--Sobic004G297900 Sobic006G235200--Sobic004G295100 Sobic006G235200--Sobic008G009400 Sobic001G300500 Sobic001G300500 Sobic006G235200--Sobic001G300500 Sobic006G235200--Sobic003G311800 Sobic006G235200--Sobic003G299300 Sobic006G172550 Sobic006G172550 Sobic006G235200--Sobic006G172550 Sobic006G235200--Sobic002G183700 Sobic002G092600 Sobic002G092600 Sobic006G235200--Sobic002G092600 Sobic003G282100 Sobic003G282100 Sobic010G270700--Sobic003G282100 Sobic010G270700--Sobic008G009400 Sobic010G270700--Sobic001G330300 SobicK026900 SobicK026900 Sobic010G270700--SobicK026900 Sobic010G270700--Sobic004G297900 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic010G270700--Sobic003G311800 Sobic010G270700--Sobic009G109000
Octagon: transcription factors


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