Gene annotation
Transcriptome id Sobic.006G260200.1
Synonym Sb06g032310
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
uncharacterized protein At4g06744 precursor, putative, expressed
UniProt C5YA34
Pfam -
Panther DB PTHR27000 PTHR27000:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G06744 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os04g57430.1 : uncharacterized protein At4g06744 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ83446
Barley HORVU2Hr1G122300.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238300 expansin precursor, putative, expressed -
2 Sobic.002G425000 VQ domain containing protein, putative, expressed -
3 Sobic.002G261500 AIR12, putative, expressed -
4 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
6 Sobic.007G090469 - -
7 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
8 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.001G237900 expansin precursor, putative, expressed -
10 Sobic.006G235200 expressed protein -
11 Sobic.001G328800 expressed protein -
12 Sobic.009G199001 - -
13 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
15 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.008G102800 expressed protein -
17 Sobic.006G197100 DNA binding protein, putative, expressed -
18 Sobic.006G172601 - -
19 Sobic.003G157600 expressed protein -
20 Sobic.009G074500 expressed protein -


Gene co-expression network
sample Sobic006G260200 Sobic006G260200 Sobic001G238300 Sobic001G238300 Sobic006G260200--Sobic001G238300 Sobic002G425000 Sobic002G425000 Sobic006G260200--Sobic002G425000 Sobic002G261500 Sobic002G261500 Sobic006G260200--Sobic002G261500 Sobic004G297900 Sobic004G297900 Sobic006G260200--Sobic004G297900 Sobic006G122800 Sobic006G122800 Sobic006G260200--Sobic006G122800 Sobic007G090469 Sobic007G090469 Sobic006G260200--Sobic007G090469 Sobic004G202400 Sobic004G202400 Sobic006G260200--Sobic004G202400 Sobic002G042200 Sobic002G042200 Sobic006G260200--Sobic002G042200 Sobic001G237900 Sobic001G237900 Sobic006G260200--Sobic001G237900 Sobic006G172601 Sobic006G172601 Sobic001G238300--Sobic006G172601 Sobic001G238300--Sobic002G261500 Sobic001G238300--Sobic004G297900 Sobic001G238300--Sobic002G425000 Sobic001G238300--Sobic007G090469 SobicK026900 SobicK026900 Sobic001G238300--SobicK026900 Sobic001G238300--Sobic006G260200 Sobic007G050200 Sobic007G050200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic002G425000--Sobic001G238300 Sobic002G425000--Sobic002G261500 Sobic008G127933 Sobic008G127933 Sobic002G425000--Sobic008G127933 Sobic002G425000--Sobic001G237900 Sobic002G425000--Sobic006G260200 Sobic002G425000--Sobic004G297900 Sobic002G425000--SobicK026900 Sobic003G053400 Sobic003G053400 Sobic002G425000--Sobic003G053400 Sobic002G425000--Sobic006G122800 Sobic002G261500--Sobic001G238300 Sobic002G261500--Sobic002G425000 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G261500--Sobic002G042200 Sobic002G261500--Sobic003G053400 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic002G261500--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic003G384700 Sobic003G384700 Sobic006G122800--Sobic003G384700 Sobic006G122800--Sobic002G042200 Sobic006G122800--Sobic002G425000 Sobic002G053700 Sobic002G053700 Sobic006G122800--Sobic002G053700 Sobic005G063400 Sobic005G063400 Sobic006G122800--Sobic005G063400 Sobic010G161800 Sobic010G161800 Sobic006G122800--Sobic010G161800 Sobic006G122800--Sobic006G260200 Sobic006G174300 Sobic006G174300 Sobic006G122800--Sobic006G174300 Sobic006G251400 Sobic006G251400 Sobic006G122800--Sobic006G251400 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500 Sobic006G197100 Sobic006G197100 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G042000 Sobic004G042000 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic004G202400--Sobic003G311800 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic002G042200--Sobic004G202400 Sobic002G042200--Sobic003G157600 Sobic002G042200--Sobic006G251400 Sobic002G042200--Sobic004G209400 Sobic001G238400 Sobic001G238400 Sobic001G237900--Sobic001G238400 Sobic010G158500 Sobic010G158500 Sobic001G237900--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic001G237900--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G237900--Sobic006G158400 Sobic001G237900--Sobic002G425000 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic010G063000 Sobic010G063000 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600
Octagon: transcription factors


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