Gene annotation
Transcriptome id Sobic.010G085800.1
Synonym Sb10g007430,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
plastocyanin-like domain containing protein, putative, expressed
UniProt C5Z6V2
Pfam PF02298
Panther DB PTHR34052 PTHR34052:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G15780 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os06g11310.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049534
Brachypodium KQK18989
Barley HORVU7Hr1G036180.1
Wheat TraesCS7A02G175400 , TraesCS7B02G080800 , TraesCS7D02G177000
Populus -


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cDNA sequences
Sobic.010G085800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
4 Sobic.009G109000 expressed protein -
5 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.008G009400 - -
7 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
9 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
10 Sobic.006G203700 EF hand family protein, putative, expressed -
11 Sobic.003G119500 expressed protein -
12 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
13 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
15 Sobic.008G005100 PMR5, putative, expressed -
16 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
19 Sobic.007G090469 - -
20 Sobic.003G007600 expressed protein -


Gene co-expression network
sample Sobic010G085800 Sobic010G085800 Sobic001G059700 Sobic001G059700 Sobic010G085800--Sobic001G059700 Sobic001G310300 Sobic001G310300 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic009G109000 Sobic009G109000 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic009G088900 Sobic009G088900 Sobic010G085800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic001G059700--Sobic010G085800 Sobic001G059700--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic001G059700--Sobic007G159450 Sobic001G238400 Sobic001G238400 Sobic001G059700--Sobic001G238400 Sobic004G318700 Sobic004G318700 Sobic001G059700--Sobic004G318700 Sobic001G059700--Sobic001G310300 Sobic003G053400 Sobic003G053400 Sobic001G059700--Sobic003G053400 Sobic001G059700--Sobic004G297900 Sobic008G005100 Sobic008G005100 Sobic001G059700--Sobic008G005100 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G514200 Sobic001G514200 Sobic001G310300--Sobic001G514200 Sobic008G055100 Sobic008G055100 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic001G310300--Sobic009G109000 Sobic001G310300--Sobic010G008400 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic002G176100 Sobic002G176100 Sobic010G008400--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G008400--Sobic002G003800 Sobic003G319500 Sobic003G319500 Sobic010G008400--Sobic003G319500 Sobic002G327300 Sobic002G327300 Sobic010G008400--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic010G008400--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic010G008400--Sobic001G500000 Sobic010G008400--Sobic010G085800 Sobic002G017800 Sobic002G017800 Sobic010G008400--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G008400--Sobic009G111000 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic009G109000--Sobic008G055100 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic008G009400--Sobic004G297900 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic003G299300 Sobic003G299300 Sobic008G009400--Sobic003G299300 Sobic010G270700 Sobic010G270700 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic009G188000 Sobic009G188000 Sobic008G009400--Sobic009G188000 Sobic008G009400--Sobic006G235200 Sobic001G330300 Sobic001G330300 Sobic008G009400--Sobic001G330300 Sobic009G088900--Sobic008G055100 Sobic009G088900--Sobic001G059700 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic002G154600 Sobic002G154600 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic003G311800--Sobic001G049900 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic004G042000 Sobic004G042000 Sobic003G311800--Sobic004G042000 Sobic007G218800--Sobic008G055100 Sobic007G218800--Sobic002G154600 Sobic007G176000 Sobic007G176000 Sobic007G218800--Sobic007G176000 Sobic010G252500 Sobic010G252500 Sobic007G218800--Sobic010G252500 Sobic007G218800--Sobic009G088900 Sobic007G218800--Sobic003G311800 Sobic007G218800--Sobic001G430100 Sobic007G218800--Sobic001G049900 Sobic007G218800--Sobic010G085800
Octagon: transcription factors


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