Gene annotation
Transcriptome id Sobic.006G203700.1
Synonym Sb06g027490
Functional annotation EF hand family protein, putative, expressed
UniProt C5YF64
Pfam -
Panther DB PTHR11639 PTHR11639:SF70
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64850 : Calcium-binding EF hand family protein
RAP-DB (Rice) LOC_Os04g51250.1 : expressed protein
MaizeGDB (Corn) Zm00025a056945
Brachypodium -
Barley HORVU2Hr1G101800.1 , HORVU2Hr1G101800.2 , HORVU2Hr1G101800.3 , HORVU2Hr1G101800.4 , HORVU2Hr1G101800.5 , HORVU2Hr1G101800.7
Wheat TraesCS2A02G434900 , TraesCS2B02G458000 , TraesCS2D02G434900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
4 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.006G197100 DNA binding protein, putative, expressed -
6 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
7 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.007G090469 - -
9 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
11 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.008G005100 PMR5, putative, expressed -
13 Sobic.003G368600 terpene synthase, putative, expressed -
14 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
15 Sobic.002G411900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@SRC2 protein, putative, expressed -
16 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.002G105300 SCP-like extracellular protein, expressed -
18 Sobic.008G106700 isoflavone reductase, putative, expressed -
19 Sobic.009G109000 expressed protein -
20 Sobic.007G178900 CXE carboxylesterase, putative, expressed -


Gene co-expression network
sample Sobic006G203700 Sobic006G203700 Sobic001G310300 Sobic001G310300 Sobic006G203700--Sobic001G310300 Sobic002G003800 Sobic002G003800 Sobic006G203700--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G203700--Sobic004G042000 Sobic010G085800 Sobic010G085800 Sobic006G203700--Sobic010G085800 Sobic006G197100 Sobic006G197100 Sobic006G203700--Sobic006G197100 Sobic010G008400 Sobic010G008400 Sobic006G203700--Sobic010G008400 Sobic001G514200 Sobic001G514200 Sobic006G203700--Sobic001G514200 Sobic007G090469 Sobic007G090469 Sobic006G203700--Sobic007G090469 Sobic001G500000 Sobic001G500000 Sobic006G203700--Sobic001G500000 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G310300--Sobic001G514200 Sobic008G055100 Sobic008G055100 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic009G109000 Sobic009G109000 Sobic001G310300--Sobic009G109000 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic003G311800 Sobic003G311800 Sobic002G003800--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic001G416200 Sobic001G416200 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic001G304100 Sobic001G304100 Sobic002G003800--Sobic001G304100 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic001G059700 Sobic001G059700 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G085800--Sobic010G008400 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic009G088900 Sobic009G088900 Sobic010G085800--Sobic009G088900 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic002G176100 Sobic002G176100 Sobic010G008400--Sobic002G176100 Sobic010G008400--Sobic002G003800 Sobic003G319500 Sobic003G319500 Sobic010G008400--Sobic003G319500 Sobic002G327300 Sobic002G327300 Sobic010G008400--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic010G008400--Sobic004G046200 Sobic010G008400--Sobic001G500000 Sobic010G008400--Sobic010G085800 Sobic002G017800 Sobic002G017800 Sobic010G008400--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G008400--Sobic009G111000 Sobic001G514200--Sobic008G055100 Sobic010G047600 Sobic010G047600 Sobic001G514200--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic001G514200--Sobic001G261460 Sobic001G514200--Sobic001G310300 Sobic010G138300 Sobic010G138300 Sobic001G514200--Sobic010G138300 Sobic009G221800 Sobic009G221800 Sobic001G514200--Sobic009G221800 Sobic005G061200 Sobic005G061200 Sobic001G514200--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic001G514200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic001G514200--Sobic002G154600 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 SobicK026900 SobicK026900 Sobic007G090469--SobicK026900 Sobic001G238300 Sobic001G238300 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic004G295100 Sobic004G295100 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic001G300500 Sobic001G300500 Sobic007G090469--Sobic001G300500 Sobic003G084400 Sobic003G084400 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic001G500000--Sobic009G111000 Sobic001G231700 Sobic001G231700 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000
Octagon: transcription factors


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