Gene annotation
Transcriptome id Sobic.008G005100.2,Sobic.008G005100.3
Synonym Sb08g000580, TBL34
Functional annotation PMR5, putative, expressed
UniProt A0A1Z5R5E0
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38320 : TRICHOME BIREFRINGENCE-LIKE 34
RAP-DB (Rice) LOC_Os11g01570.1 : PMR5, putative, expressed
MaizeGDB (Corn) Zm00025a040477 , Zm00025a040478 , Zm00025a053664 , Zm00025a033279
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
4 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.009G109000 expressed protein -
7 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.006G203700 EF hand family protein, putative, expressed -
10 Sobic.008G055100 dirigent, putative, expressed -
11 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.005G061200 dirigent, putative, expressed -
13 Sobic.002G365801 - -
14 Sobic.002G261500 AIR12, putative, expressed -
15 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
16 Sobic.009G074500 expressed protein -
17 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
18 Sobic.008G009400 - -
19 Sobic.010G138300 DUF617 domain containing protein, expressed -
20 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic008G005100 Sobic008G005100 Sobic010G085800 Sobic010G085800 Sobic008G005100--Sobic010G085800 Sobic001G310300 Sobic001G310300 Sobic008G005100--Sobic001G310300 Sobic002G154600 Sobic002G154600 Sobic008G005100--Sobic002G154600 Sobic001G059700 Sobic001G059700 Sobic008G005100--Sobic001G059700 Sobic001G514200 Sobic001G514200 Sobic008G005100--Sobic001G514200 Sobic009G109000 Sobic009G109000 Sobic008G005100--Sobic009G109000 Sobic009G088900 Sobic009G088900 Sobic008G005100--Sobic009G088900 Sobic003G053400 Sobic003G053400 Sobic008G005100--Sobic003G053400 Sobic006G203700 Sobic006G203700 Sobic008G005100--Sobic006G203700 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic010G085800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G310300--Sobic001G514200 Sobic008G055100 Sobic008G055100 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic001G310300--Sobic009G109000 Sobic001G310300--Sobic010G008400 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic002G154600--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic002G154600--Sobic002G261500 Sobic001G430100 Sobic001G430100 Sobic002G154600--Sobic001G430100 Sobic002G154600--Sobic009G088900 Sobic002G154600--Sobic008G055100 Sobic002G183700 Sobic002G183700 Sobic002G154600--Sobic002G183700 Sobic002G154600--Sobic003G311800 Sobic002G154600--Sobic004G297900 Sobic003G121100 Sobic003G121100 Sobic002G154600--Sobic003G121100 Sobic001G059700--Sobic010G085800 Sobic001G059700--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic001G059700--Sobic007G159450 Sobic001G238400 Sobic001G238400 Sobic001G059700--Sobic001G238400 Sobic004G318700 Sobic004G318700 Sobic001G059700--Sobic004G318700 Sobic001G059700--Sobic001G310300 Sobic001G059700--Sobic003G053400 Sobic001G059700--Sobic004G297900 Sobic001G059700--Sobic008G005100 Sobic001G514200--Sobic008G055100 Sobic010G047600 Sobic010G047600 Sobic001G514200--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic001G514200--Sobic001G261460 Sobic001G514200--Sobic001G310300 Sobic010G138300 Sobic010G138300 Sobic001G514200--Sobic010G138300 Sobic009G221800 Sobic009G221800 Sobic001G514200--Sobic009G221800 Sobic005G061200 Sobic005G061200 Sobic001G514200--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic001G514200--Sobic007G176000 Sobic001G514200--Sobic002G154600 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic009G109000--Sobic008G055100 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic009G109000--Sobic001G430100 Sobic009G088900--Sobic008G055100 Sobic009G088900--Sobic001G059700 Sobic009G088900--Sobic003G053400 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300 Sobic003G053400--Sobic002G261500 Sobic003G053400--Sobic009G088900 Sobic002G425000 Sobic002G425000 Sobic003G053400--Sobic002G425000 Sobic002G124500 Sobic002G124500 Sobic003G053400--Sobic002G124500 Sobic003G053400--Sobic009G109000 Sobic010G212500 Sobic010G212500 Sobic003G053400--Sobic010G212500 Sobic003G053400--Sobic004G297900 Sobic002G365550 Sobic002G365550 Sobic003G053400--Sobic002G365550 Sobic003G053400--Sobic002G365801 Sobic006G203700--Sobic001G310300 Sobic002G003800 Sobic002G003800 Sobic006G203700--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G203700--Sobic004G042000 Sobic006G203700--Sobic010G085800 Sobic006G197100 Sobic006G197100 Sobic006G203700--Sobic006G197100 Sobic006G203700--Sobic010G008400 Sobic006G203700--Sobic001G514200 Sobic007G090469 Sobic007G090469 Sobic006G203700--Sobic007G090469 Sobic001G500000 Sobic001G500000 Sobic006G203700--Sobic001G500000
Octagon: transcription factors


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