Gene annotation
Transcriptome id Sobic.002G365801.1
Synonym -
Functional annotation -
UniProt A0A1W0W764
Pfam -
Panther DB PTHR33088 PTHR33088:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a048678
Brachypodium -
Barley -
Wheat TraesCS2D02G186700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G365550 - -
2 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
3 Sobic.010G115700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.010G212500 - -
5 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
6 Sobic.002G365500 igA FC receptor precursor, putative, expressed -
7 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
8 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
11 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.002G261500 AIR12, putative, expressed -
13 Sobic.008G055100 dirigent, putative, expressed -
14 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
15 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.006G282300 - -
17 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
18 Sobic.002G311501 - -
19 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
20 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -


Gene co-expression network
sample Sobic002G365801 Sobic002G365801 Sobic002G365550 Sobic002G365550 Sobic002G365801--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic002G365801--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365801--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic002G365801--Sobic010G212500 Sobic002G368300 Sobic002G368300 Sobic002G365801--Sobic002G368300 Sobic002G365500 Sobic002G365500 Sobic002G365801--Sobic002G365500 Sobic010G096400 Sobic010G096400 Sobic002G365801--Sobic010G096400 Sobic001G379400 Sobic001G379400 Sobic002G365801--Sobic001G379400 Sobic009G088900 Sobic009G088900 Sobic002G365801--Sobic009G088900 Sobic002G365550--Sobic002G365801 Sobic002G365600 Sobic002G365600 Sobic002G365550--Sobic002G365600 Sobic002G365550--Sobic002G365500 Sobic002G365550--Sobic004G071000 Sobic002G365550--Sobic010G115700 Sobic002G365550--Sobic010G212500 Sobic002G365550--Sobic010G096400 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic004G071000--Sobic002G365801 Sobic004G071000--Sobic002G365550 Sobic004G071000--Sobic002G368300 Sobic004G071000--Sobic002G365500 Sobic008G055100 Sobic008G055100 Sobic004G071000--Sobic008G055100 Sobic004G071000--Sobic010G115700 Sobic004G071000--Sobic010G212500 Sobic004G071000--Sobic002G365600 Sobic004G071000--Sobic003G053400 Sobic010G115700--Sobic002G365801 Sobic010G115700--Sobic002G365550 Sobic010G115700--Sobic002G365500 Sobic010G115700--Sobic004G071000 Sobic010G115700--Sobic010G096400 Sobic010G115700--Sobic002G365600 Sobic010G115700--Sobic002G368300 Sobic007G178900 Sobic007G178900 Sobic010G115700--Sobic007G178900 Sobic010G115700--Sobic009G088900 Sobic002G261500 Sobic002G261500 Sobic010G212500--Sobic002G261500 Sobic004G348800 Sobic004G348800 Sobic010G212500--Sobic004G348800 Sobic010G212500--Sobic002G365801 Sobic010G212500--Sobic002G365550 Sobic001G395800 Sobic001G395800 Sobic010G212500--Sobic001G395800 Sobic003G119500 Sobic003G119500 Sobic010G212500--Sobic003G119500 Sobic010G212500--Sobic003G053400 Sobic003G311800 Sobic003G311800 Sobic010G212500--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G212500--Sobic009G109000 Sobic002G368300--Sobic002G365801 Sobic002G368300--Sobic007G178900 Sobic002G368300--Sobic004G071000 Sobic002G368300--Sobic002G365500 Sobic002G368300--Sobic002G365550 Sobic002G368300--Sobic010G096400 Sobic002G368300--Sobic009G088900 Sobic002G368300--Sobic010G212500 Sobic007G176000 Sobic007G176000 Sobic002G368300--Sobic007G176000 Sobic002G365500--Sobic002G365550 Sobic002G365500--Sobic002G365600 Sobic002G365500--Sobic010G115700 Sobic002G365500--Sobic002G365801 Sobic002G365500--Sobic004G071000 Sobic002G365500--Sobic002G368300 Sobic006G183900 Sobic006G183900 Sobic002G365500--Sobic006G183900 Sobic006G028400 Sobic006G028400 Sobic002G365500--Sobic006G028400 Sobic003G269500 Sobic003G269500 Sobic002G365500--Sobic003G269500 Sobic010G096400--Sobic008G055100 Sobic004G139300 Sobic004G139300 Sobic010G096400--Sobic004G139300 Sobic010G096400--Sobic002G365550 Sobic010G096400--Sobic002G365801 Sobic009G088500 Sobic009G088500 Sobic010G096400--Sobic009G088500 Sobic002G216100 Sobic002G216100 Sobic010G096400--Sobic002G216100 Sobic001G360500 Sobic001G360500 Sobic010G096400--Sobic001G360500 Sobic010G096400--Sobic002G368300 Sobic010G096400--Sobic007G176000 Sobic006G089000 Sobic006G089000 Sobic001G379400--Sobic006G089000 Sobic010G147200 Sobic010G147200 Sobic001G379400--Sobic010G147200 Sobic005G160700 Sobic005G160700 Sobic001G379400--Sobic005G160700 Sobic006G277700 Sobic006G277700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G234900 Sobic001G234900 Sobic001G379400--Sobic001G234900 Sobic003G337600 Sobic003G337600 Sobic001G379400--Sobic003G337600 Sobic006G174300 Sobic006G174300 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100 Sobic009G088900--Sobic008G055100 Sobic001G059700 Sobic001G059700 Sobic009G088900--Sobic001G059700 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic009G088900--Sobic002G365801 Sobic002G154600 Sobic002G154600 Sobic009G088900--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic009G088900--Sobic007G218800 Sobic009G088900--Sobic002G261500 Sobic009G088900--Sobic002G368300
Octagon: transcription factors


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