Gene annotation
Transcriptome id Sobic.001G059600.1
Synonym Sb01g005420, EDA4
Functional annotation LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5WY14
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G48140 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g57980.1 : LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium KQK20645 , KQK12769
Barley HORVU5Hr1G104750.2 , HORVU5Hr1G104750.3 , HORVU5Hr1G104750.4 , HORVU5Hr1G104750.5
Wheat TraesCS5A02G433400 , TraesCS5D02G441600 , TraesCS5B02G436600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
2 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
7 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.002G365801 - -
10 Sobic.001G250100 thaumatin, putative, expressed -
11 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
14 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
15 Sobic.010G014400 - -
16 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
17 Sobic.002G385500 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
18 Sobic.002G030800 app1, putative, expressed -
19 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -


Gene co-expression network
sample Sobic001G059600 Sobic001G059600 Sobic003G368100 Sobic003G368100 Sobic001G059600--Sobic003G368100 Sobic010G093300 Sobic010G093300 Sobic001G059600--Sobic010G093300 Sobic004G231700 Sobic004G231700 Sobic001G059600--Sobic004G231700 Sobic003G341500 Sobic003G341500 Sobic001G059600--Sobic003G341500 Sobic002G050300 Sobic002G050300 Sobic001G059600--Sobic002G050300 Sobic001G068500 Sobic001G068500 Sobic001G059600--Sobic001G068500 Sobic005G127200 Sobic005G127200 Sobic001G059600--Sobic005G127200 Sobic001G059500 Sobic001G059500 Sobic001G059600--Sobic001G059500 Sobic002G365801 Sobic002G365801 Sobic001G059600--Sobic002G365801 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic003G368100--Sobic002G365801 Sobic001G144800 Sobic001G144800 Sobic003G368100--Sobic001G144800 Sobic003G368100--Sobic010G093300 Sobic003G368100--Sobic005G127200 Sobic010G093300--Sobic005G127200 Sobic010G093300--Sobic001G068500 Sobic010G093300--Sobic001G059600 Sobic010G093300--Sobic002G050300 Sobic001G413700 Sobic001G413700 Sobic010G093300--Sobic001G413700 Sobic006G224500 Sobic006G224500 Sobic010G093300--Sobic006G224500 Sobic004G266700 Sobic004G266700 Sobic010G093300--Sobic004G266700 Sobic010G093300--Sobic003G368100 Sobic009G006300 Sobic009G006300 Sobic010G093300--Sobic009G006300 Sobic004G231700--Sobic001G059600 Sobic004G231700--Sobic003G341500 Sobic003G020200 Sobic003G020200 Sobic004G231700--Sobic003G020200 Sobic004G231700--Sobic002G050300 Sobic003G053600 Sobic003G053600 Sobic004G231700--Sobic003G053600 Sobic004G231700--Sobic010G093300 Sobic003G353200 Sobic003G353200 Sobic004G231700--Sobic003G353200 Sobic003G280000 Sobic003G280000 Sobic004G231700--Sobic003G280000 Sobic009G162300 Sobic009G162300 Sobic004G231700--Sobic009G162300 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic003G341500--Sobic004G231700 Sobic003G341500--Sobic002G050300 Sobic003G341500--Sobic010G093300 Sobic002G050300--Sobic003G368100 Sobic002G050300--Sobic001G068500 Sobic002G050300--Sobic001G059600 Sobic002G050300--Sobic010G093300 Sobic002G050300--Sobic001G059500 Sobic002G053700 Sobic002G053700 Sobic002G050300--Sobic002G053700 Sobic001G379400 Sobic001G379400 Sobic002G050300--Sobic001G379400 Sobic005G160700 Sobic005G160700 Sobic002G050300--Sobic005G160700 Sobic002G050300--Sobic003G341500 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic005G127200--Sobic010G093300 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic002G030800 Sobic002G030800 Sobic005G127200--Sobic002G030800 Sobic005G127200--Sobic003G341500 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic005G127200--Sobic001G413700 Sobic005G127200--Sobic003G368100 Sobic001G059500--Sobic003G368100 Sobic003G206700 Sobic003G206700 Sobic001G059500--Sobic003G206700 Sobic009G008800 Sobic009G008800 Sobic001G059500--Sobic009G008800 Sobic001G059500--Sobic001G068500 Sobic001G059500--Sobic001G144800 Sobic001G059500--Sobic002G050300 Sobic001G059500--Sobic001G059600 Sobic001G059500--Sobic003G341500 Sobic003G352700 Sobic003G352700 Sobic001G059500--Sobic003G352700 Sobic002G365550 Sobic002G365550 Sobic002G365801--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic002G365801--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365801--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic002G365801--Sobic010G212500 Sobic002G368300 Sobic002G368300 Sobic002G365801--Sobic002G368300 Sobic002G365500 Sobic002G365500 Sobic002G365801--Sobic002G365500 Sobic010G096400 Sobic010G096400 Sobic002G365801--Sobic010G096400 Sobic002G365801--Sobic001G379400 Sobic009G088900 Sobic009G088900 Sobic002G365801--Sobic009G088900
Octagon: transcription factors


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