Gene annotation
Transcriptome id Sobic.001G250100.1
Synonym Sb01g022110
Functional annotation thaumatin, putative, expressed
UniProt C5WM52
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40020 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os10g27280.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a051051 , Zm00025a043524 , Zm00025a006952 , Zm00025a052993
Brachypodium KQJ96675 , KQJ91229
Barley HORVU4Hr1G066130.4 , HORVU5Hr1G112160.4 , HORVU5Hr1G112160.5 , HORVU5Hr1G112160.6 , HORVU5Hr1G112160.7 , HORVU5Hr1G112160.1 , HORVU5Hr1G112160.2 , HORVU1Hr1G021650.3 , HORVU1Hr1G021650.2 , HORVU1Hr1G021650.1 , HORVU5Hr1G112160.3 , HORVU1Hr1G021650.6 , HORVU1Hr1G021650.5 , HORVU1Hr1G021650.4 , HORVU5Hr1G083240.1 , HORVU5Hr1G083240.2 , HORVU5Hr1G083240.3 , HORVU5Hr1G083240.4
Wheat TraesCS1B02G120000 , TraesCS1B02G120000 , TraesCS5A02G472800 , TraesCS1D02G100800 , TraesCS4B02G236700 , TraesCS1D02G100800 , TraesCS4D02G294400 , TraesCS5B02G485700 , TraesCS5A02G328500 , TraesCS1A02G092200 , TraesCS1A02G092200 , TraesCS5D02G334400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.006G160900 NAC domain containing protein, putative, expressed -
3 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
4 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
5 Sobic.002G030800 app1, putative, expressed -
6 Sobic.010G014400 - -
7 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G163800 No apical meristem protein, putative, expressed -
9 Sobic.004G193500 expressed protein -
10 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
11 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.003G426200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
16 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
17 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
18 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
19 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
20 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic001G250100 Sobic001G250100 Sobic001G059600 Sobic001G059600 Sobic001G250100--Sobic001G059600 Sobic006G160900 Sobic006G160900 Sobic001G250100--Sobic006G160900 Sobic001G471800 Sobic001G471800 Sobic001G250100--Sobic001G471800 Sobic009G008800 Sobic009G008800 Sobic001G250100--Sobic009G008800 Sobic002G030800 Sobic002G030800 Sobic001G250100--Sobic002G030800 Sobic010G014400 Sobic010G014400 Sobic001G250100--Sobic010G014400 Sobic003G183300 Sobic003G183300 Sobic001G250100--Sobic003G183300 Sobic001G163800 Sobic001G163800 Sobic001G250100--Sobic001G163800 Sobic004G193500 Sobic004G193500 Sobic001G250100--Sobic004G193500 Sobic003G368100 Sobic003G368100 Sobic001G059600--Sobic003G368100 Sobic010G093300 Sobic010G093300 Sobic001G059600--Sobic010G093300 Sobic004G231700 Sobic004G231700 Sobic001G059600--Sobic004G231700 Sobic003G341500 Sobic003G341500 Sobic001G059600--Sobic003G341500 Sobic002G050300 Sobic002G050300 Sobic001G059600--Sobic002G050300 Sobic001G068500 Sobic001G068500 Sobic001G059600--Sobic001G068500 Sobic005G127200 Sobic005G127200 Sobic001G059600--Sobic005G127200 Sobic001G059500 Sobic001G059500 Sobic001G059600--Sobic001G059500 Sobic002G365801 Sobic002G365801 Sobic001G059600--Sobic002G365801 Sobic006G160900--Sobic009G008800 Sobic006G160900--Sobic001G250100 Sobic003G082700 Sobic003G082700 Sobic006G160900--Sobic003G082700 Sobic010G155800 Sobic010G155800 Sobic006G160900--Sobic010G155800 Sobic001G484000 Sobic001G484000 Sobic006G160900--Sobic001G484000 Sobic006G160900--Sobic005G127200 Sobic006G160900--Sobic001G471800 Sobic006G160900--Sobic010G093300 Sobic003G352700 Sobic003G352700 Sobic006G160900--Sobic003G352700 Sobic002G146000 Sobic002G146000 Sobic001G471800--Sobic002G146000 Sobic004G047600 Sobic004G047600 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic001G471800--Sobic004G193500 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic006G031100 Sobic006G031100 Sobic001G471800--Sobic006G031100 Sobic001G471800--Sobic010G093300 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic009G008800--Sobic003G082700 Sobic001G046800 Sobic001G046800 Sobic009G008800--Sobic001G046800 Sobic003G239100 Sobic003G239100 Sobic009G008800--Sobic003G239100 Sobic001G144800 Sobic001G144800 Sobic009G008800--Sobic001G144800 Sobic003G206700 Sobic003G206700 Sobic009G008800--Sobic003G206700 Sobic002G030800--Sobic005G127200 Sobic002G030800--Sobic010G093300 Sobic002G030800--Sobic001G068500 Sobic002G030800--Sobic001G471800 Sobic001G413700 Sobic001G413700 Sobic002G030800--Sobic001G413700 Sobic002G030800--Sobic001G250100 Sobic002G030800--Sobic003G239100 Sobic002G030800--Sobic001G059600 Sobic002G030800--Sobic006G224500 Sobic010G014400--Sobic001G046800 Sobic001G261460 Sobic001G261460 Sobic010G014400--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic010G014400--Sobic010G047600 Sobic005G061200 Sobic005G061200 Sobic010G014400--Sobic005G061200 Sobic001G514200 Sobic001G514200 Sobic010G014400--Sobic001G514200 Sobic010G014400--Sobic001G059600 Sobic003G115200 Sobic003G115200 Sobic010G014400--Sobic003G115200 Sobic010G014400--Sobic001G250100 Sobic010G138300 Sobic010G138300 Sobic010G014400--Sobic010G138300 Sobic004G271800 Sobic004G271800 Sobic003G183300--Sobic004G271800 Sobic003G183300--Sobic002G146000 Sobic003G000100 Sobic003G000100 Sobic003G183300--Sobic003G000100 Sobic010G028100 Sobic010G028100 Sobic003G183300--Sobic010G028100 Sobic006G003100 Sobic006G003100 Sobic003G183300--Sobic006G003100 Sobic006G092700 Sobic006G092700 Sobic003G183300--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic003G183300--Sobic006G135300 Sobic008G135300 Sobic008G135300 Sobic003G183300--Sobic008G135300 Sobic010G070400 Sobic010G070400 Sobic003G183300--Sobic010G070400 Sobic005G022500 Sobic005G022500 Sobic001G163800--Sobic005G022500 Sobic001G163800--Sobic004G193500 Sobic001G163800--Sobic001G250100 Sobic003G287200 Sobic003G287200 Sobic001G163800--Sobic003G287200 Sobic008G133000 Sobic008G133000 Sobic001G163800--Sobic008G133000 Sobic001G002800 Sobic001G002800 Sobic001G163800--Sobic001G002800 Sobic001G503000 Sobic001G503000 Sobic001G163800--Sobic001G503000 Sobic001G163800--Sobic001G471800 Sobic009G250100 Sobic009G250100 Sobic001G163800--Sobic009G250100 Sobic004G193500--Sobic002G146000 Sobic001G274400 Sobic001G274400 Sobic004G193500--Sobic001G274400 Sobic007G073000 Sobic007G073000 Sobic004G193500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic004G193500--Sobic003G255600 Sobic004G193500--Sobic006G135300 Sobic004G193500--Sobic006G092700 Sobic004G193500--Sobic006G224500
Octagon: transcription factors


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