Gene annotation
Transcriptome id Sobic.001G068500.1
Synonym Sb01g006200
Functional annotation lysine-rich arabinogalactan protein 19 precursor, putative, expressed
UniProt A0A1Z5S4N0
Pfam -
Panther DB PTHR33088
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09530 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os03g56944.1 : lysine-rich arabinogalactan protein 19 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008418 , Zm00025a008412 , Zm00025a008413 , Zm00025a006526 , Zm00025a008415
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
2 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
11 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.002G030800 app1, putative, expressed -
13 Sobic.002G030650 - -
14 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
15 Sobic.002G030575 - -
16 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
17 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
18 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
19 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.002G311501 - -


Gene co-expression network
sample Sobic001G068500 Sobic001G068500 Sobic003G368100 Sobic003G368100 Sobic001G068500--Sobic003G368100 Sobic003G341500 Sobic003G341500 Sobic001G068500--Sobic003G341500 Sobic002G050300 Sobic002G050300 Sobic001G068500--Sobic002G050300 Sobic005G127200 Sobic005G127200 Sobic001G068500--Sobic005G127200 Sobic010G093300 Sobic010G093300 Sobic001G068500--Sobic010G093300 Sobic004G266700 Sobic004G266700 Sobic001G068500--Sobic004G266700 Sobic001G059500 Sobic001G059500 Sobic001G068500--Sobic001G059500 Sobic001G059600 Sobic001G059600 Sobic001G068500--Sobic001G059600 Sobic001G144800 Sobic001G144800 Sobic001G068500--Sobic001G144800 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic002G365801 Sobic002G365801 Sobic003G368100--Sobic002G365801 Sobic003G368100--Sobic001G144800 Sobic003G368100--Sobic010G093300 Sobic003G368100--Sobic005G127200 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic004G231700 Sobic004G231700 Sobic003G341500--Sobic004G231700 Sobic003G341500--Sobic002G050300 Sobic003G341500--Sobic010G093300 Sobic002G050300--Sobic003G368100 Sobic002G050300--Sobic001G068500 Sobic002G050300--Sobic001G059600 Sobic002G050300--Sobic010G093300 Sobic002G050300--Sobic001G059500 Sobic002G053700 Sobic002G053700 Sobic002G050300--Sobic002G053700 Sobic001G379400 Sobic001G379400 Sobic002G050300--Sobic001G379400 Sobic005G160700 Sobic005G160700 Sobic002G050300--Sobic005G160700 Sobic002G050300--Sobic003G341500 Sobic005G127200--Sobic010G093300 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic002G030800 Sobic002G030800 Sobic005G127200--Sobic002G030800 Sobic005G127200--Sobic003G341500 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic001G413700 Sobic001G413700 Sobic005G127200--Sobic001G413700 Sobic005G127200--Sobic003G368100 Sobic010G093300--Sobic005G127200 Sobic010G093300--Sobic001G068500 Sobic010G093300--Sobic001G059600 Sobic010G093300--Sobic002G050300 Sobic010G093300--Sobic001G413700 Sobic006G224500 Sobic006G224500 Sobic010G093300--Sobic006G224500 Sobic010G093300--Sobic004G266700 Sobic010G093300--Sobic003G368100 Sobic009G006300 Sobic009G006300 Sobic010G093300--Sobic009G006300 Sobic004G266700--Sobic005G127200 Sobic004G266700--Sobic003G341500 Sobic004G266700--Sobic001G144800 Sobic004G266700--Sobic001G068500 Sobic004G266700--Sobic010G093300 Sobic009G008800 Sobic009G008800 Sobic004G266700--Sobic009G008800 Sobic004G266700--Sobic003G368100 Sobic003G239100 Sobic003G239100 Sobic004G266700--Sobic003G239100 Sobic004G266700--Sobic001G059600 Sobic001G059500--Sobic003G368100 Sobic003G206700 Sobic003G206700 Sobic001G059500--Sobic003G206700 Sobic001G059500--Sobic009G008800 Sobic001G059500--Sobic001G068500 Sobic001G059500--Sobic001G144800 Sobic001G059500--Sobic002G050300 Sobic001G059500--Sobic001G059600 Sobic001G059500--Sobic003G341500 Sobic003G352700 Sobic003G352700 Sobic001G059500--Sobic003G352700 Sobic001G059600--Sobic003G368100 Sobic001G059600--Sobic010G093300 Sobic001G059600--Sobic004G231700 Sobic001G059600--Sobic003G341500 Sobic001G059600--Sobic002G050300 Sobic001G059600--Sobic001G068500 Sobic001G059600--Sobic005G127200 Sobic001G059600--Sobic001G059500 Sobic001G059600--Sobic002G365801 Sobic001G144800--Sobic003G341500 Sobic001G144800--Sobic004G266700 Sobic001G144800--Sobic003G206700 Sobic001G144800--Sobic001G059500 Sobic001G144800--Sobic001G068500 Sobic001G144800--Sobic003G368100 Sobic001G144800--Sobic009G008800 Sobic001G144800--Sobic001G059600 Sobic001G144800--Sobic005G127200
Octagon: transcription factors


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