Gene annotation
Transcriptome id Sobic.003G206700.1
Synonym Sb03g026820
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt A0A1W0VYA1
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF102
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24450 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os01g41200.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038446
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G206700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
4 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
5 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
7 Sobic.002G244300 fasciclin domain containing protein, expressed -
8 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.002G365801 - -
12 Sobic.002G053900 Cupin domain containing protein, expressed -
13 Sobic.001G261460 - -
14 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
16 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase
17 Sobic.010G014400 - -
18 Sobic.005G061200 dirigent, putative, expressed -
19 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G206700 Sobic003G206700 Sobic001G059500 Sobic001G059500 Sobic003G206700--Sobic001G059500 Sobic001G144800 Sobic001G144800 Sobic003G206700--Sobic001G144800 Sobic009G008800 Sobic009G008800 Sobic003G206700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic003G206700--Sobic003G368100 Sobic001G059600 Sobic001G059600 Sobic003G206700--Sobic001G059600 Sobic001G068500 Sobic001G068500 Sobic003G206700--Sobic001G068500 Sobic002G244300 Sobic002G244300 Sobic003G206700--Sobic002G244300 Sobic003G341500 Sobic003G341500 Sobic003G206700--Sobic003G341500 Sobic001G046800 Sobic001G046800 Sobic003G206700--Sobic001G046800 Sobic001G059500--Sobic003G368100 Sobic001G059500--Sobic003G206700 Sobic001G059500--Sobic009G008800 Sobic001G059500--Sobic001G068500 Sobic001G059500--Sobic001G144800 Sobic002G050300 Sobic002G050300 Sobic001G059500--Sobic002G050300 Sobic001G059500--Sobic001G059600 Sobic001G059500--Sobic003G341500 Sobic003G352700 Sobic003G352700 Sobic001G059500--Sobic003G352700 Sobic001G144800--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic001G144800--Sobic004G266700 Sobic001G144800--Sobic003G206700 Sobic001G144800--Sobic001G059500 Sobic001G144800--Sobic001G068500 Sobic001G144800--Sobic003G368100 Sobic001G144800--Sobic009G008800 Sobic001G144800--Sobic001G059600 Sobic005G127200 Sobic005G127200 Sobic001G144800--Sobic005G127200 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic009G008800--Sobic003G082700 Sobic009G008800--Sobic001G046800 Sobic003G239100 Sobic003G239100 Sobic009G008800--Sobic003G239100 Sobic009G008800--Sobic001G144800 Sobic009G008800--Sobic003G206700 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic002G365801 Sobic002G365801 Sobic003G368100--Sobic002G365801 Sobic003G368100--Sobic001G144800 Sobic010G093300 Sobic010G093300 Sobic003G368100--Sobic010G093300 Sobic003G368100--Sobic005G127200 Sobic001G059600--Sobic003G368100 Sobic001G059600--Sobic010G093300 Sobic004G231700 Sobic004G231700 Sobic001G059600--Sobic004G231700 Sobic001G059600--Sobic003G341500 Sobic001G059600--Sobic002G050300 Sobic001G059600--Sobic001G068500 Sobic001G059600--Sobic005G127200 Sobic001G059600--Sobic001G059500 Sobic001G059600--Sobic002G365801 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic002G244300--Sobic003G368100 Sobic002G244300--Sobic003G206700 Sobic002G244300--Sobic009G008800 Sobic009G088900 Sobic009G088900 Sobic002G244300--Sobic009G088900 Sobic002G244300--Sobic001G046800 Sobic010G083400 Sobic010G083400 Sobic002G244300--Sobic010G083400 Sobic001G261460 Sobic001G261460 Sobic002G244300--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic002G244300--Sobic010G047600 Sobic008G055100 Sobic008G055100 Sobic002G244300--Sobic008G055100 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic003G341500--Sobic004G231700 Sobic003G341500--Sobic002G050300 Sobic003G341500--Sobic010G093300 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic002G053900 Sobic002G053900 Sobic001G046800--Sobic002G053900 Sobic001G046800--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic001G046800--Sobic001G484000 Sobic010G014400 Sobic010G014400 Sobic001G046800--Sobic010G014400 Sobic003G321400 Sobic003G321400 Sobic001G046800--Sobic003G321400 Sobic003G250700 Sobic003G250700 Sobic001G046800--Sobic003G250700
Octagon: transcription factors


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