Gene annotation
Transcriptome id Sobic.005G127200.1
Synonym Sb05g018910
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5Y2T2
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF133
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G28650 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os11g31940.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a015658 , Zm00025a008991
Brachypodium KQJ88448
Barley HORVU3Hr1G024970.15 , HORVU7Hr1G024220.3 , HORVU7Hr1G024220.2 , HORVU7Hr1G024220.4 , HORVU3Hr1G024970.14 , HORVU3Hr1G024970.13 , HORVU3Hr1G024970.12 , HORVU3Hr1G024970.11 , HORVU3Hr1G024970.10 , HORVU7Hr1G024220.1 , HORVU7Hr1G024220.5 , HORVU3Hr1G024970.16 , HORVU3Hr1G024970.9 , HORVU3Hr1G024970.8 , HORVU3Hr1G024970.7 , HORVU3Hr1G024970.5 , HORVU3Hr1G024970.4 , HORVU3Hr1G024970.3 , HORVU3Hr1G024970.2 , HORVU3Hr1G024970.1
Wheat TraesCS3B02G151300 , TraesCS3A02G308200 , TraesCS3D02G134200 , TraesCS7D02G108900 , TraesCSU02G095400 , TraesCS7A02G113600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
4 Sobic.002G030800 app1, putative, expressed -
5 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.002G030650 - -
8 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
9 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
10 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
12 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
14 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
16 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
17 Sobic.006G160900 NAC domain containing protein, putative, expressed -
18 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.009G006300 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -


Gene co-expression network
sample Sobic005G127200 Sobic005G127200 Sobic010G093300 Sobic010G093300 Sobic005G127200--Sobic010G093300 Sobic004G266700 Sobic004G266700 Sobic005G127200--Sobic004G266700 Sobic001G068500 Sobic001G068500 Sobic005G127200--Sobic001G068500 Sobic002G030800 Sobic002G030800 Sobic005G127200--Sobic002G030800 Sobic003G341500 Sobic003G341500 Sobic005G127200--Sobic003G341500 Sobic001G059600 Sobic001G059600 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic001G413700 Sobic001G413700 Sobic005G127200--Sobic001G413700 Sobic003G368100 Sobic003G368100 Sobic005G127200--Sobic003G368100 Sobic010G093300--Sobic005G127200 Sobic010G093300--Sobic001G068500 Sobic010G093300--Sobic001G059600 Sobic002G050300 Sobic002G050300 Sobic010G093300--Sobic002G050300 Sobic010G093300--Sobic001G413700 Sobic006G224500 Sobic006G224500 Sobic010G093300--Sobic006G224500 Sobic010G093300--Sobic004G266700 Sobic010G093300--Sobic003G368100 Sobic009G006300 Sobic009G006300 Sobic010G093300--Sobic009G006300 Sobic004G266700--Sobic005G127200 Sobic004G266700--Sobic003G341500 Sobic001G144800 Sobic001G144800 Sobic004G266700--Sobic001G144800 Sobic004G266700--Sobic001G068500 Sobic004G266700--Sobic010G093300 Sobic009G008800 Sobic009G008800 Sobic004G266700--Sobic009G008800 Sobic004G266700--Sobic003G368100 Sobic003G239100 Sobic003G239100 Sobic004G266700--Sobic003G239100 Sobic004G266700--Sobic001G059600 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G059500 Sobic001G059500 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic002G030800--Sobic005G127200 Sobic002G030800--Sobic010G093300 Sobic002G030800--Sobic001G068500 Sobic001G471800 Sobic001G471800 Sobic002G030800--Sobic001G471800 Sobic002G030800--Sobic001G413700 Sobic001G250100 Sobic001G250100 Sobic002G030800--Sobic001G250100 Sobic002G030800--Sobic003G239100 Sobic002G030800--Sobic001G059600 Sobic002G030800--Sobic006G224500 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic004G231700 Sobic004G231700 Sobic003G341500--Sobic004G231700 Sobic003G341500--Sobic002G050300 Sobic003G341500--Sobic010G093300 Sobic001G059600--Sobic003G368100 Sobic001G059600--Sobic010G093300 Sobic001G059600--Sobic004G231700 Sobic001G059600--Sobic003G341500 Sobic001G059600--Sobic002G050300 Sobic001G059600--Sobic001G068500 Sobic001G059600--Sobic005G127200 Sobic001G059600--Sobic001G059500 Sobic002G365801 Sobic002G365801 Sobic001G059600--Sobic002G365801 Sobic002G030650--Sobic005G127200 Sobic002G030650--Sobic010G093300 Sobic002G030575 Sobic002G030575 Sobic002G030650--Sobic002G030575 Sobic002G030650--Sobic001G068500 Sobic002G030650--Sobic004G266700 Sobic002G030650--Sobic003G341500 Sobic003G023600 Sobic003G023600 Sobic002G030650--Sobic003G023600 Sobic002G030650--Sobic002G030800 Sobic002G030650--Sobic004G231700 Sobic001G413700--Sobic010G093300 Sobic001G413700--Sobic005G127200 Sobic002G409000 Sobic002G409000 Sobic001G413700--Sobic002G409000 Sobic001G413700--Sobic002G030800 Sobic001G413700--Sobic006G224500 Sobic001G413700--Sobic001G068500 Sobic001G413700--Sobic001G471800 Sobic001G413700--Sobic001G059600 Sobic001G413700--Sobic009G006300 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic003G368100--Sobic002G365801 Sobic003G368100--Sobic001G144800 Sobic003G368100--Sobic010G093300 Sobic003G368100--Sobic005G127200
Octagon: transcription factors


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