Gene annotation
Transcriptome id Sobic.001G413700.1
Synonym Sb01g038970
Functional annotation white-brown complex homolog protein, putative, expressed
UniProt C5WP95
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF180
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G55090 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os03g17350.1 : white-brown complex homolog protein, putative, expressed
MaizeGDB (Corn) Zm00025a026953 , Zm00025a001906 , Zm00025a039705 , Zm00025a040796
Brachypodium KQK10473 , KQK22254 , KQK21748 , KQK22252
Barley HORVU4Hr1G058160.1 , HORVU4Hr1G058160.2 , HORVU5Hr1G021120.1 , HORVU5Hr1G021120.2 , HORVU0Hr1G007130.2 , HORVU0Hr1G007130.1 , HORVU5Hr1G021110.1 , HORVU5Hr1G021110.2 , HORVU1Hr1G009920.3 , HORVU1Hr1G009920.2 , HORVU4Hr1G058070.4 , HORVU4Hr1G058070.2 , HORVU4Hr1G058070.3 , HORVU4Hr1G058070.1 , HORVU3Hr1G087130.1 , HORVU3Hr1G087130.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.002G409000 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.002G030800 app1, putative, expressed -
5 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
7 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
8 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G006300 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.004G193500 expressed protein -
11 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
12 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.002G030650 - -
14 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
15 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
16 Sobic.003G255600 expressed protein -
17 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
18 Sobic.002G391900 peroxidase precursor, putative, expressed -
19 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -


Gene co-expression network
sample Sobic001G413700 Sobic001G413700 Sobic010G093300 Sobic010G093300 Sobic001G413700--Sobic010G093300 Sobic005G127200 Sobic005G127200 Sobic001G413700--Sobic005G127200 Sobic002G409000 Sobic002G409000 Sobic001G413700--Sobic002G409000 Sobic002G030800 Sobic002G030800 Sobic001G413700--Sobic002G030800 Sobic006G224500 Sobic006G224500 Sobic001G413700--Sobic006G224500 Sobic001G068500 Sobic001G068500 Sobic001G413700--Sobic001G068500 Sobic001G471800 Sobic001G471800 Sobic001G413700--Sobic001G471800 Sobic001G059600 Sobic001G059600 Sobic001G413700--Sobic001G059600 Sobic009G006300 Sobic009G006300 Sobic001G413700--Sobic009G006300 Sobic010G093300--Sobic005G127200 Sobic010G093300--Sobic001G068500 Sobic010G093300--Sobic001G059600 Sobic002G050300 Sobic002G050300 Sobic010G093300--Sobic002G050300 Sobic010G093300--Sobic001G413700 Sobic010G093300--Sobic006G224500 Sobic004G266700 Sobic004G266700 Sobic010G093300--Sobic004G266700 Sobic003G368100 Sobic003G368100 Sobic010G093300--Sobic003G368100 Sobic010G093300--Sobic009G006300 Sobic005G127200--Sobic010G093300 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic005G127200--Sobic002G030800 Sobic003G341500 Sobic003G341500 Sobic005G127200--Sobic003G341500 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic005G127200--Sobic001G413700 Sobic005G127200--Sobic003G368100 Sobic002G409000--Sobic001G413700 Sobic002G409000--Sobic003G368100 Sobic002G409000--Sobic010G093300 Sobic010G115700 Sobic010G115700 Sobic002G409000--Sobic010G115700 Sobic002G409000--Sobic001G068500 Sobic005G069500 Sobic005G069500 Sobic002G409000--Sobic005G069500 Sobic002G409000--Sobic001G059600 Sobic002G365801 Sobic002G365801 Sobic002G409000--Sobic002G365801 Sobic002G409000--Sobic006G224500 Sobic002G030800--Sobic005G127200 Sobic002G030800--Sobic010G093300 Sobic002G030800--Sobic001G068500 Sobic002G030800--Sobic001G471800 Sobic002G030800--Sobic001G413700 Sobic001G250100 Sobic001G250100 Sobic002G030800--Sobic001G250100 Sobic003G239100 Sobic003G239100 Sobic002G030800--Sobic003G239100 Sobic002G030800--Sobic001G059600 Sobic002G030800--Sobic006G224500 Sobic010G152500 Sobic010G152500 Sobic006G224500--Sobic010G152500 Sobic002G391900 Sobic002G391900 Sobic006G224500--Sobic002G391900 Sobic004G009200 Sobic004G009200 Sobic006G224500--Sobic004G009200 Sobic003G382200 Sobic003G382200 Sobic006G224500--Sobic003G382200 Sobic005G216600 Sobic005G216600 Sobic006G224500--Sobic005G216600 Sobic006G031100 Sobic006G031100 Sobic006G224500--Sobic006G031100 Sobic006G097900 Sobic006G097900 Sobic006G224500--Sobic006G097900 Sobic006G085700 Sobic006G085700 Sobic006G224500--Sobic006G085700 Sobic002G146000 Sobic002G146000 Sobic006G224500--Sobic002G146000 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G059500 Sobic001G059500 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G144800 Sobic001G144800 Sobic001G068500--Sobic001G144800 Sobic001G471800--Sobic002G146000 Sobic004G047600 Sobic004G047600 Sobic001G471800--Sobic004G047600 Sobic001G471800--Sobic006G224500 Sobic004G193500 Sobic004G193500 Sobic001G471800--Sobic004G193500 Sobic003G183300 Sobic003G183300 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G360700 Sobic001G360700 Sobic001G471800--Sobic001G360700 Sobic001G471800--Sobic006G031100 Sobic001G471800--Sobic010G093300 Sobic001G059600--Sobic003G368100 Sobic001G059600--Sobic010G093300 Sobic004G231700 Sobic004G231700 Sobic001G059600--Sobic004G231700 Sobic001G059600--Sobic003G341500 Sobic001G059600--Sobic002G050300 Sobic001G059600--Sobic001G068500 Sobic001G059600--Sobic005G127200 Sobic001G059600--Sobic001G059500 Sobic001G059600--Sobic002G365801 Sobic004G002901 Sobic004G002901 Sobic009G006300--Sobic004G002901 Sobic010G268700 Sobic010G268700 Sobic009G006300--Sobic010G268700 Sobic004G346300 Sobic004G346300 Sobic009G006300--Sobic004G346300 Sobic009G006300--Sobic003G255600 Sobic009G006300--Sobic010G093300 Sobic009G006300--Sobic006G224500 Sobic009G006300--Sobic005G216600 Sobic005G197500 Sobic005G197500 Sobic009G006300--Sobic005G197500 Sobic005G060200 Sobic005G060200 Sobic009G006300--Sobic005G060200
Octagon: transcription factors


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