Gene annotation
Transcriptome id Sobic.002G030650.1
Synonym -
Functional annotation -
UniProt A0A1W0W201
Pfam -
Panther DB PTHR33088
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09530 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os07g04950.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.002G030575 - -
4 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
5 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
7 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
8 Sobic.002G030800 app1, putative, expressed -
9 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
13 Sobic.004G346300 expressed protein -
14 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
15 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
16 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
18 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
19 Sobic.009G006300 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic002G030650 Sobic002G030650 Sobic005G127200 Sobic005G127200 Sobic002G030650--Sobic005G127200 Sobic010G093300 Sobic010G093300 Sobic002G030650--Sobic010G093300 Sobic002G030575 Sobic002G030575 Sobic002G030650--Sobic002G030575 Sobic001G068500 Sobic001G068500 Sobic002G030650--Sobic001G068500 Sobic004G266700 Sobic004G266700 Sobic002G030650--Sobic004G266700 Sobic003G341500 Sobic003G341500 Sobic002G030650--Sobic003G341500 Sobic003G023600 Sobic003G023600 Sobic002G030650--Sobic003G023600 Sobic002G030800 Sobic002G030800 Sobic002G030650--Sobic002G030800 Sobic004G231700 Sobic004G231700 Sobic002G030650--Sobic004G231700 Sobic005G127200--Sobic010G093300 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic005G127200--Sobic002G030800 Sobic005G127200--Sobic003G341500 Sobic001G059600 Sobic001G059600 Sobic005G127200--Sobic001G059600 Sobic005G127200--Sobic002G030650 Sobic001G413700 Sobic001G413700 Sobic005G127200--Sobic001G413700 Sobic003G368100 Sobic003G368100 Sobic005G127200--Sobic003G368100 Sobic010G093300--Sobic005G127200 Sobic010G093300--Sobic001G068500 Sobic010G093300--Sobic001G059600 Sobic002G050300 Sobic002G050300 Sobic010G093300--Sobic002G050300 Sobic010G093300--Sobic001G413700 Sobic006G224500 Sobic006G224500 Sobic010G093300--Sobic006G224500 Sobic010G093300--Sobic004G266700 Sobic010G093300--Sobic003G368100 Sobic009G006300 Sobic009G006300 Sobic010G093300--Sobic009G006300 Sobic002G030575--Sobic003G341500 Sobic002G030575--Sobic002G030650 Sobic002G030575--Sobic001G068500 Sobic002G030575--Sobic003G368100 Sobic002G030575--Sobic002G050300 Sobic002G030575--Sobic001G059600 Sobic001G261509 Sobic001G261509 Sobic002G030575--Sobic001G261509 Sobic001G144800 Sobic001G144800 Sobic002G030575--Sobic001G144800 Sobic001G434800 Sobic001G434800 Sobic002G030575--Sobic001G434800 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G059500 Sobic001G059500 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic004G266700--Sobic005G127200 Sobic004G266700--Sobic003G341500 Sobic004G266700--Sobic001G144800 Sobic004G266700--Sobic001G068500 Sobic004G266700--Sobic010G093300 Sobic009G008800 Sobic009G008800 Sobic004G266700--Sobic009G008800 Sobic004G266700--Sobic003G368100 Sobic003G239100 Sobic003G239100 Sobic004G266700--Sobic003G239100 Sobic004G266700--Sobic001G059600 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic003G341500--Sobic004G231700 Sobic003G341500--Sobic002G050300 Sobic003G341500--Sobic010G093300 Sobic004G346300 Sobic004G346300 Sobic003G023600--Sobic004G346300 Sobic007G212000 Sobic007G212000 Sobic003G023600--Sobic007G212000 Sobic007G177400 Sobic007G177400 Sobic003G023600--Sobic007G177400 Sobic004G002901 Sobic004G002901 Sobic003G023600--Sobic004G002901 Sobic001G181600 Sobic001G181600 Sobic003G023600--Sobic001G181600 Sobic007G111800 Sobic007G111800 Sobic003G023600--Sobic007G111800 Sobic003G154500 Sobic003G154500 Sobic003G023600--Sobic003G154500 Sobic003G357700 Sobic003G357700 Sobic003G023600--Sobic003G357700 Sobic005G105700 Sobic005G105700 Sobic003G023600--Sobic005G105700 Sobic002G030800--Sobic005G127200 Sobic002G030800--Sobic010G093300 Sobic002G030800--Sobic001G068500 Sobic001G471800 Sobic001G471800 Sobic002G030800--Sobic001G471800 Sobic002G030800--Sobic001G413700 Sobic001G250100 Sobic001G250100 Sobic002G030800--Sobic001G250100 Sobic002G030800--Sobic003G239100 Sobic002G030800--Sobic001G059600 Sobic002G030800--Sobic006G224500 Sobic004G231700--Sobic001G059600 Sobic004G231700--Sobic003G341500 Sobic003G020200 Sobic003G020200 Sobic004G231700--Sobic003G020200 Sobic004G231700--Sobic002G050300 Sobic003G053600 Sobic003G053600 Sobic004G231700--Sobic003G053600 Sobic004G231700--Sobic010G093300 Sobic003G353200 Sobic003G353200 Sobic004G231700--Sobic003G353200 Sobic003G280000 Sobic003G280000 Sobic004G231700--Sobic003G280000 Sobic009G162300 Sobic009G162300 Sobic004G231700--Sobic009G162300
Octagon: transcription factors


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