Gene annotation
Transcriptome id Sobic.002G030575.1
Synonym -
Functional annotation -
UniProt A0A1W0W1Z1
Pfam -
Panther DB PTHR33088 PTHR33088:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g56944.1 : lysine-rich arabinogalactan protein 19 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044992
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.002G030650 - -
3 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
4 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
5 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.001G261509 - K09872: aquaporin PIP
8 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G434800 MYB-like transcription factor DIVARICATA, putative, expressed -
10 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
11 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.002G003500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.001G014700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
19 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G382900 HAD superfamily phosphatase, putative, expressed -


Gene co-expression network
sample Sobic002G030575 Sobic002G030575 Sobic003G341500 Sobic003G341500 Sobic002G030575--Sobic003G341500 Sobic002G030650 Sobic002G030650 Sobic002G030575--Sobic002G030650 Sobic001G068500 Sobic001G068500 Sobic002G030575--Sobic001G068500 Sobic003G368100 Sobic003G368100 Sobic002G030575--Sobic003G368100 Sobic002G050300 Sobic002G050300 Sobic002G030575--Sobic002G050300 Sobic001G059600 Sobic001G059600 Sobic002G030575--Sobic001G059600 Sobic001G261509 Sobic001G261509 Sobic002G030575--Sobic001G261509 Sobic001G144800 Sobic001G144800 Sobic002G030575--Sobic001G144800 Sobic001G434800 Sobic001G434800 Sobic002G030575--Sobic001G434800 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic004G266700 Sobic004G266700 Sobic003G341500--Sobic004G266700 Sobic003G341500--Sobic001G059600 Sobic003G341500--Sobic003G368100 Sobic005G127200 Sobic005G127200 Sobic003G341500--Sobic005G127200 Sobic004G231700 Sobic004G231700 Sobic003G341500--Sobic004G231700 Sobic003G341500--Sobic002G050300 Sobic010G093300 Sobic010G093300 Sobic003G341500--Sobic010G093300 Sobic002G030650--Sobic005G127200 Sobic002G030650--Sobic010G093300 Sobic002G030650--Sobic002G030575 Sobic002G030650--Sobic001G068500 Sobic002G030650--Sobic004G266700 Sobic002G030650--Sobic003G341500 Sobic003G023600 Sobic003G023600 Sobic002G030650--Sobic003G023600 Sobic002G030800 Sobic002G030800 Sobic002G030650--Sobic002G030800 Sobic002G030650--Sobic004G231700 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G059500 Sobic001G059500 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic003G368100--Sobic001G068500 Sobic003G368100--Sobic002G050300 Sobic003G368100--Sobic001G059600 Sobic003G368100--Sobic001G059500 Sobic003G368100--Sobic003G341500 Sobic002G365801 Sobic002G365801 Sobic003G368100--Sobic002G365801 Sobic003G368100--Sobic001G144800 Sobic003G368100--Sobic010G093300 Sobic003G368100--Sobic005G127200 Sobic002G050300--Sobic003G368100 Sobic002G050300--Sobic001G068500 Sobic002G050300--Sobic001G059600 Sobic002G050300--Sobic010G093300 Sobic002G050300--Sobic001G059500 Sobic002G053700 Sobic002G053700 Sobic002G050300--Sobic002G053700 Sobic001G379400 Sobic001G379400 Sobic002G050300--Sobic001G379400 Sobic005G160700 Sobic005G160700 Sobic002G050300--Sobic005G160700 Sobic002G050300--Sobic003G341500 Sobic001G059600--Sobic003G368100 Sobic001G059600--Sobic010G093300 Sobic001G059600--Sobic004G231700 Sobic001G059600--Sobic003G341500 Sobic001G059600--Sobic002G050300 Sobic001G059600--Sobic001G068500 Sobic001G059600--Sobic005G127200 Sobic001G059600--Sobic001G059500 Sobic001G059600--Sobic002G365801 Sobic001G502000 Sobic001G502000 Sobic001G261509--Sobic001G502000 Sobic005G222500 Sobic005G222500 Sobic001G261509--Sobic005G222500 Sobic007G158800 Sobic007G158800 Sobic001G261509--Sobic007G158800 Sobic006G089000 Sobic006G089000 Sobic001G261509--Sobic006G089000 Sobic002G183700 Sobic002G183700 Sobic001G261509--Sobic002G183700 Sobic004G029100 Sobic004G029100 Sobic001G261509--Sobic004G029100 Sobic006G277500 Sobic006G277500 Sobic001G261509--Sobic006G277500 Sobic007G158600 Sobic007G158600 Sobic001G261509--Sobic007G158600 Sobic008G068300 Sobic008G068300 Sobic001G261509--Sobic008G068300 Sobic001G144800--Sobic003G341500 Sobic001G144800--Sobic004G266700 Sobic003G206700 Sobic003G206700 Sobic001G144800--Sobic003G206700 Sobic001G144800--Sobic001G059500 Sobic001G144800--Sobic001G068500 Sobic001G144800--Sobic003G368100 Sobic009G008800 Sobic009G008800 Sobic001G144800--Sobic009G008800 Sobic001G144800--Sobic001G059600 Sobic001G144800--Sobic005G127200 Sobic004G297900 Sobic004G297900 Sobic001G434800--Sobic004G297900 Sobic007G164400 Sobic007G164400 Sobic001G434800--Sobic007G164400 Sobic004G229400 Sobic004G229400 Sobic001G434800--Sobic004G229400 Sobic001G434800--Sobic001G261509 Sobic001G434800--Sobic006G089000 Sobic002G261300 Sobic002G261300 Sobic001G434800--Sobic002G261300 Sobic008G009400 Sobic008G009400 Sobic001G434800--Sobic008G009400 Sobic006G172550 Sobic006G172550 Sobic001G434800--Sobic006G172550 Sobic001G382900 Sobic001G382900 Sobic001G434800--Sobic001G382900
Octagon: transcription factors


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