Gene annotation
Transcriptome id Sobic.007G090436.1
Synonym -
Functional annotation -
UniProt A0A1Z5R9S0
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF45
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57560 : Xyloglucan endotransglucosylase/hydrolase family protein
RAP-DB (Rice) LOC_Os08g13920.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a054963 , Zm00025a054966 , Zm00025a054577 , Zm00025a054958
Brachypodium KQK13370 , KQK13368 , KQK13369 , KQJ95698 , KQJ95697
Barley HORVU7Hr1G021950.2 , HORVU7Hr1G021950.1 , HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU3Hr1G016820.1 , HORVU3Hr1G016820.2 , HORVU3Hr1G016820.3 , HORVU3Hr1G016820.4 , HORVU3Hr1G016820.5 , HORVU3Hr1G016820.6 , HORVU3Hr1G016850.1 , HORVU3Hr1G016850.3 , HORVU3Hr1G016850.2 , HORVU3Hr1G016850.4 , HORVU3Hr1G016830.1 , HORVU7Hr1G021820.2 , HORVU7Hr1G021820.3 , HORVU7Hr1G021820.1 , HORVU7Hr1G012600.2 , HORVU7Hr1G012600.3 , HORVU7Hr1G012600.4 , HORVU7Hr1G012600.5 , HORVU6Hr1G093230.1 , HORVU6Hr1G093230.2 , HORVU3Hr1G016800.2 , HORVU3Hr1G016800.1
Wheat TraesCS7A02G103600 , TraesCS3B02G108700 , TraesCS7D02G058200 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS3D02G093800 , TraesCS3A02G093400 , TraesCS6A02G408300 , TraesCS3B02G108600 , TraesCS4A02G402200 , TraesCS4A02G402200 , TraesCS3A02G093700 , TraesCS3B02G108800 , TraesCS7A02G103500 , TraesCS4A02G402300 , TraesCS7D02G097400 , TraesCS3D02G093700 , TraesCS3A02G093600 , TraesCS3D02G094000 , TraesCS7D02G097300 , TraesCS3D02G093900 , TraesCS6B02G454200 , TraesCS7A02G063300 , TraesCS5B02G028800 , TraesCS3A02G093500 , TraesCS6D02G392100 , TraesCS5D02G038400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
2 Sobic.003G250700 fasciclin domain containing protein, expressed -
3 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
4 Sobic.007G147800 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
6 Sobic.010G014400 - -
7 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G244300 fasciclin domain containing protein, expressed -
9 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
11 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
12 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.002G365801 - -
14 Sobic.003G000200 AWPM-19-like membrane family protein, putative, expressed -
15 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
16 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
17 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
18 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.009G215000 - -
20 Sobic.007G159450 - -


Gene co-expression network
sample Sobic007G090436 Sobic007G090436 Sobic003G206700 Sobic003G206700 Sobic007G090436--Sobic003G206700 Sobic003G250700 Sobic003G250700 Sobic007G090436--Sobic003G250700 Sobic001G107100 Sobic001G107100 Sobic007G090436--Sobic001G107100 Sobic007G147800 Sobic007G147800 Sobic007G090436--Sobic007G147800 Sobic002G338400 Sobic002G338400 Sobic007G090436--Sobic002G338400 Sobic010G014400 Sobic010G014400 Sobic007G090436--Sobic010G014400 Sobic001G144800 Sobic001G144800 Sobic007G090436--Sobic001G144800 Sobic002G244300 Sobic002G244300 Sobic007G090436--Sobic002G244300 Sobic001G046800 Sobic001G046800 Sobic007G090436--Sobic001G046800 Sobic001G059500 Sobic001G059500 Sobic003G206700--Sobic001G059500 Sobic003G206700--Sobic001G144800 Sobic009G008800 Sobic009G008800 Sobic003G206700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic003G206700--Sobic003G368100 Sobic001G059600 Sobic001G059600 Sobic003G206700--Sobic001G059600 Sobic001G068500 Sobic001G068500 Sobic003G206700--Sobic001G068500 Sobic003G206700--Sobic002G244300 Sobic003G341500 Sobic003G341500 Sobic003G206700--Sobic003G341500 Sobic003G206700--Sobic001G046800 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic003G250700--Sobic001G046800 Sobic003G000200 Sobic003G000200 Sobic003G250700--Sobic003G000200 Sobic010G047600 Sobic010G047600 Sobic003G250700--Sobic010G047600 Sobic003G321400 Sobic003G321400 Sobic003G250700--Sobic003G321400 Sobic003G250700--Sobic010G014400 Sobic004G170800 Sobic004G170800 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500 Sobic001G107100--Sobic001G038300 Sobic001G107100--Sobic003G250700 Sobic002G396400 Sobic002G396400 Sobic001G107100--Sobic002G396400 Sobic001G107200 Sobic001G107200 Sobic001G107100--Sobic001G107200 Sobic002G333800 Sobic002G333800 Sobic001G107100--Sobic002G333800 Sobic002G252000 Sobic002G252000 Sobic001G107100--Sobic002G252000 Sobic006G278100 Sobic006G278100 Sobic001G107100--Sobic006G278100 Sobic001G107100--Sobic001G156500 Sobic001G107100--Sobic007G090436 Sobic007G147800--Sobic007G090436 Sobic010G106700 Sobic010G106700 Sobic007G147800--Sobic010G106700 Sobic007G147800--Sobic001G046800 Sobic003G239100 Sobic003G239100 Sobic007G147800--Sobic003G239100 Sobic007G147800--Sobic009G008800 Sobic007G147800--Sobic003G206700 Sobic002G053900 Sobic002G053900 Sobic007G147800--Sobic002G053900 Sobic007G147800--Sobic001G144800 Sobic005G194900 Sobic005G194900 Sobic007G147800--Sobic005G194900 Sobic002G338400--Sobic002G252000 Sobic009G232200 Sobic009G232200 Sobic002G338400--Sobic009G232200 Sobic002G338400--Sobic002G396400 Sobic002G128800 Sobic002G128800 Sobic002G338400--Sobic002G128800 Sobic006G075000 Sobic006G075000 Sobic002G338400--Sobic006G075000 Sobic002G338400--Sobic006G278100 Sobic001G418100 Sobic001G418100 Sobic002G338400--Sobic001G418100 Sobic002G347300 Sobic002G347300 Sobic002G338400--Sobic002G347300 Sobic006G038200 Sobic006G038200 Sobic002G338400--Sobic006G038200 Sobic010G014400--Sobic001G046800 Sobic001G261460 Sobic001G261460 Sobic010G014400--Sobic001G261460 Sobic010G014400--Sobic010G047600 Sobic005G061200 Sobic005G061200 Sobic010G014400--Sobic005G061200 Sobic001G514200 Sobic001G514200 Sobic010G014400--Sobic001G514200 Sobic010G014400--Sobic001G059600 Sobic003G115200 Sobic003G115200 Sobic010G014400--Sobic003G115200 Sobic001G250100 Sobic001G250100 Sobic010G014400--Sobic001G250100 Sobic010G138300 Sobic010G138300 Sobic010G014400--Sobic010G138300 Sobic001G144800--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic001G144800--Sobic004G266700 Sobic001G144800--Sobic003G206700 Sobic001G144800--Sobic001G059500 Sobic001G144800--Sobic001G068500 Sobic001G144800--Sobic003G368100 Sobic001G144800--Sobic009G008800 Sobic001G144800--Sobic001G059600 Sobic005G127200 Sobic005G127200 Sobic001G144800--Sobic005G127200 Sobic002G244300--Sobic003G368100 Sobic002G244300--Sobic003G206700 Sobic002G244300--Sobic009G008800 Sobic009G088900 Sobic009G088900 Sobic002G244300--Sobic009G088900 Sobic002G244300--Sobic001G046800 Sobic010G083400 Sobic010G083400 Sobic002G244300--Sobic010G083400 Sobic002G244300--Sobic001G261460 Sobic002G244300--Sobic010G047600 Sobic008G055100 Sobic008G055100 Sobic002G244300--Sobic008G055100 Sobic001G046800--Sobic010G047600 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic001G046800--Sobic002G053900 Sobic001G046800--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic001G046800--Sobic001G484000 Sobic001G046800--Sobic010G014400 Sobic001G046800--Sobic003G321400 Sobic001G046800--Sobic003G250700
Octagon: transcription factors


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