Gene annotation
Transcriptome id Sobic.009G232100.1
Synonym Sb09g028480, FLA13
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
fasciclin domain containing protein, expressed
UniProt C5YVJ7
Pfam PF02469
Panther DB PTHR32077 PTHR32077:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03170 : FASCICLIN-like arabinogalactan-protein 11
RAP-DB (Rice) LOC_Os01g47780.1 : fasciclin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028119 , Zm00025a036603
Brachypodium KQK04883 , KQK09116
Barley HORVU3Hr1G061130.1 , HORVU3Hr1G061130.2 , HORVU1Hr1G087530.2 , HORVU1Hr1G087530.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G232100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
3 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
4 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
7 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
8 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G109000 expressed protein -
10 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
13 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
16 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
18 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
19 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
20 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G232100 Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic009G232100--Sobic009G088900 Sobic001G049900 Sobic001G049900 Sobic009G232100--Sobic001G049900 Sobic009G188000 Sobic009G188000 Sobic009G232100--Sobic009G188000 Sobic001G310300 Sobic001G310300 Sobic009G232100--Sobic001G310300 Sobic010G085800 Sobic010G085800 Sobic009G232100--Sobic010G085800 Sobic001G361600 Sobic001G361600 Sobic009G232100--Sobic001G361600 Sobic002G396400 Sobic002G396400 Sobic009G232100--Sobic002G396400 Sobic001G304100 Sobic001G304100 Sobic009G232100--Sobic001G304100 Sobic009G109000 Sobic009G109000 Sobic009G232100--Sobic009G109000 Sobic008G055100 Sobic008G055100 Sobic009G088900--Sobic008G055100 Sobic001G059700 Sobic001G059700 Sobic009G088900--Sobic001G059700 Sobic003G053400 Sobic003G053400 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic002G154600 Sobic002G154600 Sobic009G088900--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic009G088900--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300 Sobic003G311800 Sobic003G311800 Sobic001G049900--Sobic003G311800 Sobic002G003800 Sobic002G003800 Sobic001G049900--Sobic002G003800 Sobic010G184800 Sobic010G184800 Sobic001G049900--Sobic010G184800 Sobic001G049900--Sobic009G109000 Sobic001G430100 Sobic001G430100 Sobic001G049900--Sobic001G430100 Sobic006G197100 Sobic006G197100 Sobic001G049900--Sobic006G197100 Sobic001G049900--Sobic008G055100 Sobic004G042000 Sobic004G042000 Sobic001G049900--Sobic004G042000 Sobic004G310200 Sobic004G310200 Sobic001G049900--Sobic004G310200 Sobic001G313600 Sobic001G313600 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic003G084400 Sobic003G084400 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G514200 Sobic001G514200 Sobic001G310300--Sobic001G514200 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic001G310300--Sobic009G109000 Sobic010G008400 Sobic010G008400 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G085800--Sobic010G008400 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic010G085800--Sobic008G009400 Sobic010G085800--Sobic009G088900 Sobic010G085800--Sobic003G311800 Sobic010G085800--Sobic007G218800 Sobic001G361600--Sobic001G295200 Sobic005G113300 Sobic005G113300 Sobic001G361600--Sobic005G113300 Sobic006G116700 Sobic006G116700 Sobic001G361600--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic001G361600--Sobic001G018900 Sobic004G220000 Sobic004G220000 Sobic001G361600--Sobic004G220000 Sobic003G078200 Sobic003G078200 Sobic001G361600--Sobic003G078200 Sobic006G141700 Sobic006G141700 Sobic001G361600--Sobic006G141700 Sobic001G361600--Sobic009G188000 Sobic003G408100 Sobic003G408100 Sobic001G361600--Sobic003G408100 Sobic001G418100 Sobic001G418100 Sobic002G396400--Sobic001G418100 Sobic001G038300 Sobic001G038300 Sobic002G396400--Sobic001G038300 Sobic001G475500 Sobic001G475500 Sobic002G396400--Sobic001G475500 Sobic001G409100 Sobic001G409100 Sobic002G396400--Sobic001G409100 Sobic002G128800 Sobic002G128800 Sobic002G396400--Sobic002G128800 Sobic002G396400--Sobic009G232100 Sobic002G396400--Sobic002G154600 Sobic009G181800 Sobic009G181800 Sobic002G396400--Sobic009G181800 Sobic002G396400--Sobic009G088900 Sobic001G304100--Sobic009G188000 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic009G109000--Sobic001G049900 Sobic009G109000--Sobic008G055100 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic009G109000--Sobic001G430100
Octagon: transcription factors


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