Gene annotation
Transcriptome id Sobic.002G396400.1
Synonym Sb02g041150
Functional annotation uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed
UniProt C5X401
Pfam -
Panther DB PTHR33976 PTHR33976:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06035 : Glycoprotein membrane precursor GPI-anchored
RAP-DB (Rice) LOC_Os07g45060.1 : uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015316
Brachypodium KQK14940
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G396400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
3 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
4 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
5 Sobic.002G128800 fiber protein Fb34, putative, expressed -
6 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
7 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
8 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
9 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.003G410800 exostosin family domain containing protein, expressed -
11 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
13 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
15 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase
16 Sobic.008G005100 PMR5, putative, expressed -
17 Sobic.001G434300 expressed protein -
18 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
19 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
20 Sobic.003G219800 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G396400 Sobic002G396400 Sobic001G418100 Sobic001G418100 Sobic002G396400--Sobic001G418100 Sobic001G038300 Sobic001G038300 Sobic002G396400--Sobic001G038300 Sobic001G475500 Sobic001G475500 Sobic002G396400--Sobic001G475500 Sobic001G409100 Sobic001G409100 Sobic002G396400--Sobic001G409100 Sobic002G128800 Sobic002G128800 Sobic002G396400--Sobic002G128800 Sobic009G232100 Sobic009G232100 Sobic002G396400--Sobic009G232100 Sobic002G154600 Sobic002G154600 Sobic002G396400--Sobic002G154600 Sobic009G181800 Sobic009G181800 Sobic002G396400--Sobic009G181800 Sobic009G088900 Sobic009G088900 Sobic002G396400--Sobic009G088900 Sobic003G219800 Sobic003G219800 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic001G418100--Sobic002G396400 Sobic001G418100--Sobic009G181800 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic001G038300--Sobic002G396400 Sobic001G107100 Sobic001G107100 Sobic001G038300--Sobic001G107100 Sobic003G250700 Sobic003G250700 Sobic001G038300--Sobic003G250700 Sobic001G038300--Sobic001G418100 Sobic010G047600 Sobic010G047600 Sobic001G038300--Sobic010G047600 Sobic001G434300 Sobic001G434300 Sobic001G038300--Sobic001G434300 Sobic001G038300--Sobic001G475500 Sobic007G150800 Sobic007G150800 Sobic001G038300--Sobic007G150800 Sobic003G122200 Sobic003G122200 Sobic001G038300--Sobic003G122200 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic003G160700 Sobic003G160700 Sobic001G475500--Sobic003G160700 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic001G409100--Sobic002G396400 Sobic003G410800 Sobic003G410800 Sobic001G409100--Sobic003G410800 Sobic004G221300 Sobic004G221300 Sobic001G409100--Sobic004G221300 Sobic006G036400 Sobic006G036400 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G224300 Sobic001G224300 Sobic001G409100--Sobic001G224300 Sobic001G409100--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic001G409100--Sobic010G180100 Sobic009G220100 Sobic009G220100 Sobic001G409100--Sobic009G220100 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic006G156000 Sobic006G156000 Sobic002G128800--Sobic006G156000 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic009G232100--Sobic009G088900 Sobic001G049900 Sobic001G049900 Sobic009G232100--Sobic001G049900 Sobic009G188000 Sobic009G188000 Sobic009G232100--Sobic009G188000 Sobic001G310300 Sobic001G310300 Sobic009G232100--Sobic001G310300 Sobic010G085800 Sobic010G085800 Sobic009G232100--Sobic010G085800 Sobic009G232100--Sobic001G361600 Sobic009G232100--Sobic002G396400 Sobic001G304100 Sobic001G304100 Sobic009G232100--Sobic001G304100 Sobic009G109000 Sobic009G109000 Sobic009G232100--Sobic009G109000 Sobic007G218800 Sobic007G218800 Sobic002G154600--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic002G154600--Sobic002G261500 Sobic001G430100 Sobic001G430100 Sobic002G154600--Sobic001G430100 Sobic002G154600--Sobic009G088900 Sobic002G154600--Sobic008G055100 Sobic002G183700 Sobic002G183700 Sobic002G154600--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic002G154600--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic002G154600--Sobic004G297900 Sobic003G121100 Sobic003G121100 Sobic002G154600--Sobic003G121100 Sobic009G181800--Sobic001G418100 Sobic009G181800--Sobic003G219800 Sobic010G252401 Sobic010G252401 Sobic009G181800--Sobic010G252401 Sobic008G186100 Sobic008G186100 Sobic009G181800--Sobic008G186100 Sobic009G181800--Sobic005G113300 Sobic003G027400 Sobic003G027400 Sobic009G181800--Sobic003G027400 Sobic002G393400 Sobic002G393400 Sobic009G181800--Sobic002G393400 Sobic002G250000 Sobic002G250000 Sobic009G181800--Sobic002G250000 Sobic004G310200 Sobic004G310200 Sobic009G181800--Sobic004G310200 Sobic009G088900--Sobic008G055100 Sobic001G059700 Sobic001G059700 Sobic009G088900--Sobic001G059700 Sobic003G053400 Sobic003G053400 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.