Gene annotation
Transcriptome id Sobic.005G112800.1,Sobic.005G112800.2
Synonym ATSAHH1, SAHH1, Sb05g014470, EMB1395, HOG1, MEE58
Functional annotation erythronate-4-phosphate dehydrogenase, putative, expressed
UniProt A0A1B6PRP0 , A0A1B6PRR1
Pfam PF02826 PF05221
Panther DB PTHR23420
NCBI CDD -
KEGG Orthology K01251; E3.3.1.1, adenosylhomocysteinase
Gene Ontology GO:0006730; one-carbon metabolic process GO:0004013adenosylhomocysteinase activity


Orthologs (automatic annotation)
TAIR AT4G13940 : S-adenosyl-L-homocysteine hydrolase
RAP-DB (Rice) LOC_Os11g26850.2 : erythronate-4-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a029777
Brachypodium KQJ88547
Barley HORVU2Hr1G110120.1 , HORVU1Hr1G064320.2 , HORVU7Hr1G023890.1 , HORVU7Hr1G023890.2 , HORVU2Hr1G110120.5 , HORVU2Hr1G110120.4 , HORVU2Hr1G110120.3 , HORVU2Hr1G110120.2 , HORVU2Hr1G109370.2 , HORVU2Hr1G109370.1
Wheat TraesCS2D02G493500 , TraesCS2B02G517500 , TraesCS2B02G521600 , TraesCS2B02G521600 , TraesCS2B02G521600 , TraesCS2A02G493600 , TraesCS2A02G493600 , TraesCS2D02G489900 , TraesCS2A02G489600 , TraesCS2A02G489600
Populus PNT57778 , PNT57776 , PNT57777 , PNS95475 , PNS95476


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cDNA sequences
Sobic.005G112800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
3 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
4 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
5 Sobic.003G219800 transferase family protein, putative, expressed -
6 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
7 Sobic.002G304900 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
8 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
9 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
10 Sobic.009G212200 expressed protein -
11 Sobic.009G076400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
12 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
13 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
14 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
15 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
16 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
17 Sobic.001G304400 expressed protein -
18 Sobic.006G156000 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
19 Sobic.008G055100 dirigent, putative, expressed -
20 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A


Gene co-expression network
sample Sobic005G112800 Sobic005G112800 Sobic001G418100 Sobic001G418100 Sobic005G112800--Sobic001G418100 Sobic001G444800 Sobic001G444800 Sobic005G112800--Sobic001G444800 Sobic001G040100 Sobic001G040100 Sobic005G112800--Sobic001G040100 Sobic006G035900 Sobic006G035900 Sobic005G112800--Sobic006G035900 Sobic003G219800 Sobic003G219800 Sobic005G112800--Sobic003G219800 Sobic010G264300 Sobic010G264300 Sobic005G112800--Sobic010G264300 Sobic002G304900 Sobic002G304900 Sobic005G112800--Sobic002G304900 Sobic003G443300 Sobic003G443300 Sobic005G112800--Sobic003G443300 Sobic001G057300 Sobic001G057300 Sobic005G112800--Sobic001G057300 Sobic001G418100--Sobic003G219800 Sobic001G418100--Sobic005G112800 Sobic002G396400 Sobic002G396400 Sobic001G418100--Sobic002G396400 Sobic009G181800 Sobic009G181800 Sobic001G418100--Sobic009G181800 Sobic002G154600 Sobic002G154600 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic002G128800 Sobic002G128800 Sobic001G418100--Sobic002G128800 Sobic001G475500 Sobic001G475500 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic003G363800 Sobic003G363800 Sobic001G444800--Sobic003G363800 Sobic001G085400 Sobic001G085400 Sobic001G444800--Sobic001G085400 Sobic009G076400 Sobic009G076400 Sobic001G444800--Sobic009G076400 Sobic003G249700 Sobic003G249700 Sobic001G444800--Sobic003G249700 Sobic003G387900 Sobic003G387900 Sobic001G444800--Sobic003G387900 Sobic007G019400 Sobic007G019400 Sobic001G444800--Sobic007G019400 Sobic002G255300 Sobic002G255300 Sobic001G444800--Sobic002G255300 Sobic007G178600 Sobic007G178600 Sobic001G444800--Sobic007G178600 Sobic009G227400 Sobic009G227400 Sobic001G444800--Sobic009G227400 Sobic001G040100--Sobic005G112800 Sobic001G040100--Sobic003G219800 Sobic002G356400 Sobic002G356400 Sobic001G040100--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic001G040100--Sobic003G209000 Sobic003G151600 Sobic003G151600 Sobic001G040100--Sobic003G151600 Sobic003G410500 Sobic003G410500 Sobic001G040100--Sobic003G410500 Sobic006G156000 Sobic006G156000 Sobic001G040100--Sobic006G156000 Sobic002G418400 Sobic002G418400 Sobic001G040100--Sobic002G418400 Sobic002G257300 Sobic002G257300 Sobic001G040100--Sobic002G257300 Sobic006G035900--Sobic001G057300 Sobic006G216600 Sobic006G216600 Sobic006G035900--Sobic006G216600 Sobic006G035900--Sobic005G112800 Sobic008G132400 Sobic008G132400 Sobic006G035900--Sobic008G132400 Sobic001G334300 Sobic001G334300 Sobic006G035900--Sobic001G334300 Sobic006G035900--Sobic002G304900 Sobic006G035900--Sobic010G264300 Sobic003G261100 Sobic003G261100 Sobic006G035900--Sobic003G261100 Sobic001G370700 Sobic001G370700 Sobic006G035900--Sobic001G370700 Sobic003G219800--Sobic001G418100 Sobic003G219800--Sobic009G181800 Sobic003G219800--Sobic001G444800 Sobic003G219800--Sobic006G156000 Sobic003G219800--Sobic003G443300 Sobic003G219800--Sobic001G040100 Sobic003G219800--Sobic005G112800 Sobic005G113300 Sobic005G113300 Sobic003G219800--Sobic005G113300 Sobic009G238900 Sobic009G238900 Sobic003G219800--Sobic009G238900 Sobic001G286200 Sobic001G286200 Sobic010G264300--Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic010G264300--Sobic002G078300 Sobic002G308300 Sobic002G308300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic010G264300--Sobic001G370700 Sobic001G304400 Sobic001G304400 Sobic010G264300--Sobic001G304400 Sobic002G180300 Sobic002G180300 Sobic010G264300--Sobic002G180300 Sobic002G304900--Sobic001G085400 Sobic009G233400 Sobic009G233400 Sobic002G304900--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G304900--Sobic001G058900 Sobic002G304900--Sobic001G334300 Sobic009G179100 Sobic009G179100 Sobic002G304900--Sobic009G179100 Sobic005G050500 Sobic005G050500 Sobic002G304900--Sobic005G050500 Sobic002G304900--Sobic003G387900 Sobic010G069400 Sobic010G069400 Sobic002G304900--Sobic010G069400 Sobic001G039400 Sobic001G039400 Sobic002G304900--Sobic001G039400 Sobic003G443300--Sobic001G304400 Sobic001G418900 Sobic001G418900 Sobic003G443300--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic003G443300--Sobic001G483100 Sobic003G443300--Sobic001G085400 Sobic003G443300--Sobic006G216600 Sobic003G443300--Sobic006G156000 Sobic003G443300--Sobic009G212200 Sobic003G443300--Sobic003G249700 Sobic003G443300--Sobic003G219800 Sobic001G057300--Sobic006G216600 Sobic001G057300--Sobic002G304900 Sobic008G135000 Sobic008G135000 Sobic001G057300--Sobic008G135000 Sobic001G057300--Sobic001G058900 Sobic001G057300--Sobic001G334300 Sobic001G057300--Sobic001G085400 Sobic001G057300--Sobic006G035900 Sobic002G115000 Sobic002G115000 Sobic001G057300--Sobic002G115000 Sobic001G057300--Sobic003G387900
Octagon: transcription factors


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