Gene annotation
Transcriptome id Sobic.001G059700.1
Synonym
Functional annotation LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1B6QHI2
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22600 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g57970.2 : LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a008535 , Zm00025a016587
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G059700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.007G159450 - -
4 Sobic.001G238400 expansin precursor, putative, expressed -
5 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
6 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
8 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.008G005100 PMR5, putative, expressed -
10 Sobic.002G425000 VQ domain containing protein, putative, expressed -
11 Sobic.008G009400 - -
12 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.005G061200 dirigent, putative, expressed -
14 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
15 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
17 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.009G109000 expressed protein -
19 Sobic.003G007600 expressed protein -
20 Sobic.010G008400 bark storage protein A precursor, putative, expressed -


Gene co-expression network
sample Sobic001G059700 Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic001G059700--Sobic010G085800 Sobic009G088900 Sobic009G088900 Sobic001G059700--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic001G059700--Sobic007G159450 Sobic001G238400 Sobic001G238400 Sobic001G059700--Sobic001G238400 Sobic004G318700 Sobic004G318700 Sobic001G059700--Sobic004G318700 Sobic001G310300 Sobic001G310300 Sobic001G059700--Sobic001G310300 Sobic003G053400 Sobic003G053400 Sobic001G059700--Sobic003G053400 Sobic004G297900 Sobic004G297900 Sobic001G059700--Sobic004G297900 Sobic008G005100 Sobic008G005100 Sobic001G059700--Sobic008G005100 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic009G109000 Sobic009G109000 Sobic010G085800--Sobic009G109000 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic010G085800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic008G055100 Sobic008G055100 Sobic009G088900--Sobic008G055100 Sobic009G088900--Sobic001G059700 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic002G154600 Sobic002G154600 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300 Sobic007G159450--Sobic001G059700 Sobic007G159450--Sobic009G088900 Sobic007G159450--Sobic003G053400 Sobic001G382900 Sobic001G382900 Sobic007G159450--Sobic001G382900 Sobic007G159450--Sobic010G085800 Sobic007G159450--Sobic004G297900 Sobic007G159450--Sobic009G109000 Sobic007G159450--Sobic008G005100 Sobic009G232100 Sobic009G232100 Sobic007G159450--Sobic009G232100 Sobic001G304100 Sobic001G304100 Sobic001G238400--Sobic001G304100 Sobic001G237900 Sobic001G237900 Sobic001G238400--Sobic001G237900 Sobic003G007600 Sobic003G007600 Sobic001G238400--Sobic003G007600 Sobic009G188000 Sobic009G188000 Sobic001G238400--Sobic009G188000 Sobic001G238400--Sobic004G318700 Sobic003G299300 Sobic003G299300 Sobic001G238400--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G238400--Sobic004G292900 Sobic006G234800 Sobic006G234800 Sobic001G238400--Sobic006G234800 Sobic006G132900 Sobic006G132900 Sobic001G238400--Sobic006G132900 Sobic001G416200 Sobic001G416200 Sobic004G318700--Sobic001G416200 Sobic004G318700--Sobic001G238400 Sobic004G318700--Sobic001G304100 Sobic001G161500 Sobic001G161500 Sobic004G318700--Sobic001G161500 Sobic002G213600 Sobic002G213600 Sobic004G318700--Sobic002G213600 Sobic004G318700--Sobic009G188000 Sobic004G318700--Sobic001G237900 Sobic004G349125 Sobic004G349125 Sobic004G318700--Sobic004G349125 Sobic004G202400 Sobic004G202400 Sobic004G318700--Sobic004G202400 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G514200 Sobic001G514200 Sobic001G310300--Sobic001G514200 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic001G310300--Sobic009G109000 Sobic001G310300--Sobic010G008400 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic003G053400--Sobic002G261500 Sobic003G053400--Sobic009G088900 Sobic002G425000 Sobic002G425000 Sobic003G053400--Sobic002G425000 Sobic002G124500 Sobic002G124500 Sobic003G053400--Sobic002G124500 Sobic003G053400--Sobic009G109000 Sobic010G212500 Sobic010G212500 Sobic003G053400--Sobic010G212500 Sobic003G053400--Sobic004G297900 Sobic002G365550 Sobic002G365550 Sobic003G053400--Sobic002G365550 Sobic003G053400--Sobic002G365801 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic008G005100--Sobic010G085800 Sobic008G005100--Sobic001G310300 Sobic008G005100--Sobic002G154600 Sobic008G005100--Sobic001G059700 Sobic008G005100--Sobic001G514200 Sobic008G005100--Sobic009G109000 Sobic008G005100--Sobic009G088900 Sobic008G005100--Sobic003G053400 Sobic008G005100--Sobic006G203700
Octagon: transcription factors


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