Gene annotation
Transcriptome id Sobic.003G305700.1
Synonym Sb03g035420, ATGSTF13
Functional annotation glutathione S-transferase, putative, expressed
UniProt C5XKV8
Pfam PF00043 PF02798
Panther DB PTHR11260 PTHR11260:SF262
NCBI CDD KOG0867; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G62760 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os01g55830.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a039958
Brachypodium -
Barley HORVU3Hr1G074040.2 , HORVU3Hr1G074040.3 , HORVU3Hr1G074040.1 , HORVU3Hr1G074040.4 , HORVU3Hr1G074040.5
Wheat -
Populus -


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cDNA sequences
Sobic.003G305700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.006G203700 EF hand family protein, putative, expressed -
3 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
4 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
5 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
8 Sobic.001G328800 expressed protein -
9 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
10 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
11 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
12 Sobic.003G371750 - -
13 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
14 Sobic.005G061200 dirigent, putative, expressed -
15 Sobic.001G300500 expansin precursor, putative, expressed -
16 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
18 Sobic.010G003700 scarecrow, putative, expressed -
19 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e


Gene co-expression network
sample Sobic003G305700 Sobic003G305700 Sobic010G085800 Sobic010G085800 Sobic003G305700--Sobic010G085800 Sobic006G203700 Sobic006G203700 Sobic003G305700--Sobic006G203700 Sobic004G051700 Sobic004G051700 Sobic003G305700--Sobic004G051700 Sobic009G232100 Sobic009G232100 Sobic003G305700--Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic003G305700--Sobic009G088900 Sobic001G310300 Sobic001G310300 Sobic003G305700--Sobic001G310300 Sobic007G218800 Sobic007G218800 Sobic003G305700--Sobic007G218800 Sobic001G328800 Sobic001G328800 Sobic003G305700--Sobic001G328800 Sobic001G444800 Sobic001G444800 Sobic003G305700--Sobic001G444800 Sobic001G059700 Sobic001G059700 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic009G109000 Sobic009G109000 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic010G085800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic010G085800--Sobic003G311800 Sobic010G085800--Sobic007G218800 Sobic006G203700--Sobic001G310300 Sobic002G003800 Sobic002G003800 Sobic006G203700--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G203700--Sobic004G042000 Sobic006G203700--Sobic010G085800 Sobic006G197100 Sobic006G197100 Sobic006G203700--Sobic006G197100 Sobic006G203700--Sobic010G008400 Sobic001G514200 Sobic001G514200 Sobic006G203700--Sobic001G514200 Sobic007G090469 Sobic007G090469 Sobic006G203700--Sobic007G090469 Sobic001G500000 Sobic001G500000 Sobic006G203700--Sobic001G500000 Sobic010G012500 Sobic010G012500 Sobic004G051700--Sobic010G012500 Sobic002G190900 Sobic002G190900 Sobic004G051700--Sobic002G190900 Sobic001G048832 Sobic001G048832 Sobic004G051700--Sobic001G048832 Sobic007G051000 Sobic007G051000 Sobic004G051700--Sobic007G051000 Sobic004G211833 Sobic004G211833 Sobic004G051700--Sobic004G211833 Sobic002G398901 Sobic002G398901 Sobic004G051700--Sobic002G398901 Sobic002G257300 Sobic002G257300 Sobic004G051700--Sobic002G257300 Sobic002G175100 Sobic002G175100 Sobic004G051700--Sobic002G175100 Sobic010G204500 Sobic010G204500 Sobic004G051700--Sobic010G204500 Sobic009G232100--Sobic009G088900 Sobic001G049900 Sobic001G049900 Sobic009G232100--Sobic001G049900 Sobic009G188000 Sobic009G188000 Sobic009G232100--Sobic009G188000 Sobic009G232100--Sobic001G310300 Sobic009G232100--Sobic010G085800 Sobic001G361600 Sobic001G361600 Sobic009G232100--Sobic001G361600 Sobic002G396400 Sobic002G396400 Sobic009G232100--Sobic002G396400 Sobic001G304100 Sobic001G304100 Sobic009G232100--Sobic001G304100 Sobic009G232100--Sobic009G109000 Sobic008G055100 Sobic008G055100 Sobic009G088900--Sobic008G055100 Sobic009G088900--Sobic001G059700 Sobic003G053400 Sobic003G053400 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic002G365801 Sobic002G365801 Sobic009G088900--Sobic002G365801 Sobic002G154600 Sobic002G154600 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic009G088900--Sobic002G261500 Sobic002G368300 Sobic002G368300 Sobic009G088900--Sobic002G368300 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G310300--Sobic001G514200 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic001G310300--Sobic009G109000 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic007G218800--Sobic008G055100 Sobic007G218800--Sobic002G154600 Sobic007G176000 Sobic007G176000 Sobic007G218800--Sobic007G176000 Sobic010G252500 Sobic010G252500 Sobic007G218800--Sobic010G252500 Sobic007G218800--Sobic009G088900 Sobic007G218800--Sobic003G311800 Sobic001G430100 Sobic001G430100 Sobic007G218800--Sobic001G430100 Sobic007G218800--Sobic001G049900 Sobic007G218800--Sobic010G085800 Sobic006G157900 Sobic006G157900 Sobic001G328800--Sobic006G157900 Sobic010G270500 Sobic010G270500 Sobic001G328800--Sobic010G270500 Sobic006G260200 Sobic006G260200 Sobic001G328800--Sobic006G260200 Sobic001G328800--Sobic003G311800 Sobic004G262200 Sobic004G262200 Sobic001G328800--Sobic004G262200 Sobic003G007600 Sobic003G007600 Sobic001G328800--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic001G328800--Sobic003G299300 Sobic006G235200 Sobic006G235200 Sobic001G328800--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic001G328800--Sobic010G270700 Sobic003G363800 Sobic003G363800 Sobic001G444800--Sobic003G363800 Sobic001G085400 Sobic001G085400 Sobic001G444800--Sobic001G085400 Sobic009G076400 Sobic009G076400 Sobic001G444800--Sobic009G076400 Sobic003G249700 Sobic003G249700 Sobic001G444800--Sobic003G249700 Sobic003G387900 Sobic003G387900 Sobic001G444800--Sobic003G387900 Sobic007G019400 Sobic007G019400 Sobic001G444800--Sobic007G019400 Sobic002G255300 Sobic002G255300 Sobic001G444800--Sobic002G255300 Sobic007G178600 Sobic007G178600 Sobic001G444800--Sobic007G178600 Sobic009G227400 Sobic009G227400 Sobic001G444800--Sobic009G227400
Octagon: transcription factors


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