Gene annotation
Transcriptome id Sobic.010G003700.1
Synonym Sb10g000520, ATHAM3, HAM3
Functional annotation scarecrow, putative, expressed
UniProt C5Z246
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00150 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os06g01620.1 : scarecrow, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK20066
Barley HORVU7Hr1G001300.4 , HORVU7Hr1G001300.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G036900 MYB family transcription factor, putative, expressed -
2 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.005G078800 expressed protein -
4 Sobic.003G211200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
5 Sobic.001G328800 expressed protein -
6 Sobic.002G066400 OsFBDUF18 - F-box and DUF domain containing protein, expressed -
7 Sobic.004G262200 DNA binding protein, putative, expressed -
8 Sobic.003G344600 BAG domain containing protein, expressed -
9 Sobic.002G278300 thaumatin, putative, expressed -
10 Sobic.001G009500 - -
11 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
12 Sobic.003G371750 - -
13 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
14 Sobic.001G282100 peptide transporter PTR2, putative, expressed -
15 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
16 Sobic.006G206000 WRKY68, expressed -
17 Sobic.001G086900 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
18 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
19 Sobic.009G155050 - K14431: transcription factor TGA
20 Sobic.002G254200 expressed protein -


Gene co-expression network
sample Sobic010G003700 Sobic010G003700 Sobic008G036900 Sobic008G036900 Sobic010G003700--Sobic008G036900 Sobic003G305700 Sobic003G305700 Sobic010G003700--Sobic003G305700 Sobic005G078800 Sobic005G078800 Sobic010G003700--Sobic005G078800 Sobic003G211200 Sobic003G211200 Sobic010G003700--Sobic003G211200 Sobic001G328800 Sobic001G328800 Sobic010G003700--Sobic001G328800 Sobic002G066400 Sobic002G066400 Sobic010G003700--Sobic002G066400 Sobic004G262200 Sobic004G262200 Sobic010G003700--Sobic004G262200 Sobic003G344600 Sobic003G344600 Sobic010G003700--Sobic003G344600 Sobic002G278300 Sobic002G278300 Sobic010G003700--Sobic002G278300 Sobic008G036900--Sobic010G003700 Sobic001G225200 Sobic001G225200 Sobic008G036900--Sobic001G225200 Sobic008G036900--Sobic001G328800 Sobic006G206000 Sobic006G206000 Sobic008G036900--Sobic006G206000 Sobic006G157500 Sobic006G157500 Sobic008G036900--Sobic006G157500 Sobic006G241400 Sobic006G241400 Sobic008G036900--Sobic006G241400 Sobic001G282100 Sobic001G282100 Sobic008G036900--Sobic001G282100 Sobic009G016201 Sobic009G016201 Sobic008G036900--Sobic009G016201 Sobic007G126100 Sobic007G126100 Sobic008G036900--Sobic007G126100 Sobic010G085800 Sobic010G085800 Sobic003G305700--Sobic010G085800 Sobic006G203700 Sobic006G203700 Sobic003G305700--Sobic006G203700 Sobic004G051700 Sobic004G051700 Sobic003G305700--Sobic004G051700 Sobic009G232100 Sobic009G232100 Sobic003G305700--Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic003G305700--Sobic009G088900 Sobic001G310300 Sobic001G310300 Sobic003G305700--Sobic001G310300 Sobic007G218800 Sobic007G218800 Sobic003G305700--Sobic007G218800 Sobic003G305700--Sobic001G328800 Sobic001G444800 Sobic001G444800 Sobic003G305700--Sobic001G444800 Sobic005G078800--Sobic001G328800 Sobic005G078800--Sobic004G262200 Sobic006G260200 Sobic006G260200 Sobic005G078800--Sobic006G260200 Sobic001G247600 Sobic001G247600 Sobic005G078800--Sobic001G247600 Sobic006G059700 Sobic006G059700 Sobic005G078800--Sobic006G059700 Sobic003G371750 Sobic003G371750 Sobic005G078800--Sobic003G371750 Sobic005G078800--Sobic010G003700 Sobic004G225900 Sobic004G225900 Sobic005G078800--Sobic004G225900 Sobic004G069200 Sobic004G069200 Sobic005G078800--Sobic004G069200 Sobic001G009500 Sobic001G009500 Sobic003G211200--Sobic001G009500 Sobic009G077800 Sobic009G077800 Sobic003G211200--Sobic009G077800 Sobic003G211200--Sobic003G344600 Sobic009G229000 Sobic009G229000 Sobic003G211200--Sobic009G229000 Sobic003G211200--Sobic001G247600 Sobic002G255200 Sobic002G255200 Sobic003G211200--Sobic002G255200 Sobic003G393700 Sobic003G393700 Sobic003G211200--Sobic003G393700 Sobic002G335300 Sobic002G335300 Sobic003G211200--Sobic002G335300 Sobic007G087200 Sobic007G087200 Sobic003G211200--Sobic007G087200 Sobic006G157900 Sobic006G157900 Sobic001G328800--Sobic006G157900 Sobic010G270500 Sobic010G270500 Sobic001G328800--Sobic010G270500 Sobic001G328800--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic001G328800--Sobic003G311800 Sobic001G328800--Sobic004G262200 Sobic003G007600 Sobic003G007600 Sobic001G328800--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic001G328800--Sobic003G299300 Sobic006G235200 Sobic006G235200 Sobic001G328800--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic001G328800--Sobic010G270700 Sobic002G330000 Sobic002G330000 Sobic002G066400--Sobic002G330000 Sobic003G181500 Sobic003G181500 Sobic002G066400--Sobic003G181500 Sobic009G230100 Sobic009G230100 Sobic002G066400--Sobic009G230100 Sobic009G023200 Sobic009G023200 Sobic002G066400--Sobic009G023200 Sobic003G321700 Sobic003G321700 Sobic002G066400--Sobic003G321700 Sobic004G308400 Sobic004G308400 Sobic002G066400--Sobic004G308400 Sobic002G066400--Sobic010G003700 Sobic003G350300 Sobic003G350300 Sobic002G066400--Sobic003G350300 Sobic010G237000 Sobic010G237000 Sobic002G066400--Sobic010G237000 Sobic004G262200--Sobic003G371750 Sobic004G262200--Sobic006G059700 Sobic004G262200--Sobic001G328800 Sobic003G280400 Sobic003G280400 Sobic004G262200--Sobic003G280400 Sobic006G197100 Sobic006G197100 Sobic004G262200--Sobic006G197100 Sobic004G042000 Sobic004G042000 Sobic004G262200--Sobic004G042000 Sobic004G262200--Sobic006G260200 Sobic009G221500 Sobic009G221500 Sobic004G262200--Sobic009G221500 Sobic003G404600 Sobic003G404600 Sobic004G262200--Sobic003G404600 Sobic003G249800 Sobic003G249800 Sobic003G344600--Sobic003G249800 Sobic003G344600--Sobic001G009500 Sobic003G429000 Sobic003G429000 Sobic003G344600--Sobic003G429000 Sobic009G180000 Sobic009G180000 Sobic003G344600--Sobic009G180000 Sobic001G054900 Sobic001G054900 Sobic003G344600--Sobic001G054900 Sobic002G282400 Sobic002G282400 Sobic003G344600--Sobic002G282400 Sobic003G344600--Sobic002G335300 Sobic003G344600--Sobic002G330000 Sobic003G344600--Sobic010G237000 Sobic003G436800 Sobic003G436800 Sobic002G278300--Sobic003G436800 Sobic009G055100 Sobic009G055100 Sobic002G278300--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic002G278300--Sobic009G040900 Sobic009G159200 Sobic009G159200 Sobic002G278300--Sobic009G159200 Sobic001G056700 Sobic001G056700 Sobic002G278300--Sobic001G056700 Sobic009G166700 Sobic009G166700 Sobic002G278300--Sobic009G166700 Sobic007G177100 Sobic007G177100 Sobic002G278300--Sobic007G177100 Sobic002G278300--Sobic004G069200 Sobic009G075900 Sobic009G075900 Sobic002G278300--Sobic009G075900
Octagon: transcription factors


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