Gene annotation
Transcriptome id Sobic.008G036900.1,Sobic.008G036900.2
Synonym Sb08g003180
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YRS2 , A0A1Z5R4Q8
Pfam PF00249
Panther DB PTHR31003
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68670 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os02g22020.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053877 , Zm00025a053886
Brachypodium -
Barley HORVU2Hr1G020140.13 , HORVU2Hr1G020140.12 , HORVU2Hr1G020140.11 , HORVU2Hr1G020140.10 , HORVU2Hr1G020140.14 , HORVU2Hr1G020140.9 , HORVU2Hr1G020140.3 , HORVU2Hr1G020140.2 , HORVU2Hr1G020140.1 , HORVU2Hr1G020140.7 , HORVU2Hr1G020140.6 , HORVU2Hr1G020140.5 , HORVU2Hr1G020140.4
Wheat TraesCS2D02G119100 , TraesCS2D02G119100 , TraesCS2A02G116100 , TraesCS2A02G116100 , TraesCS2B02G135600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G003700 scarecrow, putative, expressed -
2 Sobic.001G225200 expressed protein -
3 Sobic.001G328800 expressed protein -
4 Sobic.006G206000 WRKY68, expressed -
5 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
6 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
7 Sobic.001G282100 peptide transporter PTR2, putative, expressed -
8 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
9 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.001G225300 - -
11 Sobic.003G344600 BAG domain containing protein, expressed -
12 Sobic.002G254200 expressed protein -
13 Sobic.009G033600 "OsSAMS1(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659917)@S-adenosylmethionine synthetase, putative, expressed K00789: S-adenosylmethionine synthetase
14 Sobic.002G066400 OsFBDUF18 - F-box and DUF domain containing protein, expressed -
15 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
16 Sobic.002G327100 expressed protein -
17 Sobic.004G066600 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
18 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
19 Sobic.009G065300 expressed protein -
20 Sobic.005G078800 expressed protein -


Gene co-expression network
sample Sobic008G036900 Sobic008G036900 Sobic010G003700 Sobic010G003700 Sobic008G036900--Sobic010G003700 Sobic001G225200 Sobic001G225200 Sobic008G036900--Sobic001G225200 Sobic001G328800 Sobic001G328800 Sobic008G036900--Sobic001G328800 Sobic006G206000 Sobic006G206000 Sobic008G036900--Sobic006G206000 Sobic006G157500 Sobic006G157500 Sobic008G036900--Sobic006G157500 Sobic006G241400 Sobic006G241400 Sobic008G036900--Sobic006G241400 Sobic001G282100 Sobic001G282100 Sobic008G036900--Sobic001G282100 Sobic009G016201 Sobic009G016201 Sobic008G036900--Sobic009G016201 Sobic007G126100 Sobic007G126100 Sobic008G036900--Sobic007G126100 Sobic010G003700--Sobic008G036900 Sobic003G305700 Sobic003G305700 Sobic010G003700--Sobic003G305700 Sobic005G078800 Sobic005G078800 Sobic010G003700--Sobic005G078800 Sobic003G211200 Sobic003G211200 Sobic010G003700--Sobic003G211200 Sobic010G003700--Sobic001G328800 Sobic002G066400 Sobic002G066400 Sobic010G003700--Sobic002G066400 Sobic004G262200 Sobic004G262200 Sobic010G003700--Sobic004G262200 Sobic003G344600 Sobic003G344600 Sobic010G003700--Sobic003G344600 Sobic002G278300 Sobic002G278300 Sobic010G003700--Sobic002G278300 Sobic001G225300 Sobic001G225300 Sobic001G225200--Sobic001G225300 Sobic002G254200 Sobic002G254200 Sobic001G225200--Sobic002G254200 Sobic001G225200--Sobic006G157500 Sobic006G191600 Sobic006G191600 Sobic001G225200--Sobic006G191600 Sobic003G406900 Sobic003G406900 Sobic001G225200--Sobic003G406900 Sobic006G269200 Sobic006G269200 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic006G154500 Sobic006G154500 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic006G157900 Sobic006G157900 Sobic001G328800--Sobic006G157900 Sobic010G270500 Sobic010G270500 Sobic001G328800--Sobic010G270500 Sobic006G260200 Sobic006G260200 Sobic001G328800--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic001G328800--Sobic003G311800 Sobic001G328800--Sobic004G262200 Sobic003G007600 Sobic003G007600 Sobic001G328800--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic001G328800--Sobic003G299300 Sobic006G235200 Sobic006G235200 Sobic001G328800--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic001G328800--Sobic010G270700 Sobic002G302500 Sobic002G302500 Sobic006G206000--Sobic002G302500 Sobic001G234800 Sobic001G234800 Sobic006G206000--Sobic001G234800 Sobic009G074100 Sobic009G074100 Sobic006G206000--Sobic009G074100 Sobic006G158266 Sobic006G158266 Sobic006G206000--Sobic006G158266 Sobic002G326100 Sobic002G326100 Sobic006G206000--Sobic002G326100 Sobic001G367600 Sobic001G367600 Sobic006G206000--Sobic001G367600 Sobic006G206000--Sobic006G157500 Sobic009G230100 Sobic009G230100 Sobic006G206000--Sobic009G230100 Sobic002G327300 Sobic002G327300 Sobic006G206000--Sobic002G327300 Sobic009G168900 Sobic009G168900 Sobic006G157500--Sobic009G168900 Sobic006G157500--Sobic003G265200 Sobic002G339100 Sobic002G339100 Sobic006G157500--Sobic002G339100 Sobic003G260300 Sobic003G260300 Sobic006G157500--Sobic003G260300 Sobic001G477600 Sobic001G477600 Sobic006G157500--Sobic001G477600 Sobic001G318700 Sobic001G318700 Sobic006G157500--Sobic001G318700 Sobic009G184000 Sobic009G184000 Sobic006G157500--Sobic009G184000 Sobic004G109900 Sobic004G109900 Sobic006G157500--Sobic004G109900 Sobic001G112200 Sobic001G112200 Sobic006G157500--Sobic001G112200 Sobic004G279700 Sobic004G279700 Sobic006G241400--Sobic004G279700 Sobic006G241350 Sobic006G241350 Sobic006G241400--Sobic006G241350 Sobic003G400200 Sobic003G400200 Sobic006G241400--Sobic003G400200 Sobic006G241600 Sobic006G241600 Sobic006G241400--Sobic006G241600 Sobic002G421600 Sobic002G421600 Sobic006G241400--Sobic002G421600 Sobic006G241400--Sobic007G126100 Sobic006G241400--Sobic008G036900 Sobic003G395400 Sobic003G395400 Sobic006G241400--Sobic003G395400 Sobic006G241400--Sobic002G254200 Sobic002G263800 Sobic002G263800 Sobic001G282100--Sobic002G263800 Sobic001G483100 Sobic001G483100 Sobic001G282100--Sobic001G483100 Sobic001G282100--Sobic004G262200 Sobic001G282100--Sobic009G016201 Sobic001G282100--Sobic003G344600 Sobic004G051700 Sobic004G051700 Sobic001G282100--Sobic004G051700 Sobic001G494000 Sobic001G494000 Sobic001G282100--Sobic001G494000 Sobic010G039800 Sobic010G039800 Sobic001G282100--Sobic010G039800 Sobic001G533500 Sobic001G533500 Sobic001G282100--Sobic001G533500 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic003G249800 Sobic003G249800 Sobic009G016201--Sobic003G249800 Sobic001G037000 Sobic001G037000 Sobic009G016201--Sobic001G037000 Sobic008G161000 Sobic008G161000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic007G126100--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic007G126100--Sobic004G212900 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic007G126100--Sobic009G016201 Sobic009G159200 Sobic009G159200 Sobic007G126100--Sobic009G159200 Sobic007G126100--Sobic004G172700 Sobic007G126100--Sobic006G157500 Sobic002G282400 Sobic002G282400 Sobic007G126100--Sobic002G282400
Octagon: transcription factors


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