Gene annotation
Transcriptome id Sobic.004G066600.1
Synonym ARR12, Sb04g005580, RR12
Functional annotation two-component response regulator, putative, expressed
UniProt C5XWW5
Pfam PF00249 PF00072
Panther DB PTHR26402 PTHR26402:SF529
NCBI CDD KOG1601; GATA-4/5/6 transcription factors
KEGG Orthology K14491; two-component response regulator ARR-B family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT2G25180 : response regulator 12
RAP-DB (Rice) LOC_Os02g08500.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a036134 , Zm00025a019018 , Zm00025a019247
Brachypodium KQK16814 , KQJ93682
Barley HORVU7Hr1G112840.1 , HORVU7Hr1G112830.1 , HORVU7Hr1G112840.3 , HORVU7Hr1G112840.2 , HORVU7Hr1G112830.2 , HORVU7Hr1G112890.2 , HORVU7Hr1G112890.1 , HORVU7Hr1G112950.5 , HORVU6Hr1G028680.1 , HORVU6Hr1G028680.2 , HORVU6Hr1G028680.3 , HORVU6Hr1G028680.4 , HORVU6Hr1G028680.5 , HORVU6Hr1G028680.6 , HORVU7Hr1G030050.4 , HORVU7Hr1G030050.6 , HORVU7Hr1G030050.1 , HORVU7Hr1G030050.3 , HORVU7Hr1G030050.2 , HORVU7Hr1G030000.2 , HORVU7Hr1G030000.3 , HORVU7Hr1G030000.1 , HORVU7Hr1G030000.7 , HORVU7Hr1G030000.4 , HORVU7Hr1G030000.5 , HORVU7Hr1G030000.9 , HORVU7Hr1G030000.12 , HORVU7Hr1G030000.13 , HORVU7Hr1G030000.15 , HORVU7Hr1G030000.6 , HORVU7Hr1G030000.8
Wheat TraesCS3A02G473800 , TraesCS7B02G422100 , TraesCS7B02G421000 , TraesCS7A02G511300 , TraesCS7B02G408600 , TraesCS7D02G489600 , TraesCS7B02G049200 , TraesCS3B02G517000 , TraesCS7B02G422000 , TraesCS7D02G148000 , TraesCS6B02G174400 , TraesCS7A02G511100 , TraesCS7A02G146400 , TraesCS7A02G502300 , TraesCS7D02G500600 , TraesCS7A02G146500 , TraesCS7D02G499700 , TraesCSU02G040900 , TraesCS6A02G146200 , TraesCS6A02G146200 , TraesCS6A02G146200 , TraesCS6A02G146200 , TraesCS3A02G473600 , TraesCS7B02G049000 , TraesCS7A02G146700 , TraesCS6D02G135500 , TraesCS6D02G135500 , TraesCS6D02G135500 , TraesCS6D02G135500 , TraesCS7B02G408700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C
2 Sobic.002G176100 membrane protein, putative, expressed -
3 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
4 Sobic.004G101300 expressed protein -
5 Sobic.003G319500 receptor protein kinase, putative, expressed -
6 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
7 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
9 Sobic.002G190900 expressed protein -
10 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
11 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
12 Sobic.010G012500 ATOZI1, putative, expressed -
13 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.003G113700 expressed protein -
15 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
17 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
19 Sobic.001G483100 peptidase, T1 family, putative, expressed K02730: 20S proteasome subunit alpha 1
20 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -


Gene co-expression network
sample Sobic004G066600 Sobic004G066600 Sobic010G239500 Sobic010G239500 Sobic004G066600--Sobic010G239500 Sobic002G176100 Sobic002G176100 Sobic004G066600--Sobic002G176100 Sobic002G345300 Sobic002G345300 Sobic004G066600--Sobic002G345300 Sobic004G101300 Sobic004G101300 Sobic004G066600--Sobic004G101300 Sobic003G319500 Sobic003G319500 Sobic004G066600--Sobic003G319500 Sobic003G429000 Sobic003G429000 Sobic004G066600--Sobic003G429000 Sobic007G087200 Sobic007G087200 Sobic004G066600--Sobic007G087200 Sobic005G188100 Sobic005G188100 Sobic004G066600--Sobic005G188100 Sobic002G190900 Sobic002G190900 Sobic004G066600--Sobic002G190900 Sobic002G175100 Sobic002G175100 Sobic010G239500--Sobic002G175100 Sobic002G081600 Sobic002G081600 Sobic010G239500--Sobic002G081600 Sobic001G374700 Sobic001G374700 Sobic010G239500--Sobic001G374700 Sobic002G398901 Sobic002G398901 Sobic010G239500--Sobic002G398901 Sobic006G213000 Sobic006G213000 Sobic010G239500--Sobic006G213000 Sobic001G481400 Sobic001G481400 Sobic010G239500--Sobic001G481400 Sobic006G137100 Sobic006G137100 Sobic010G239500--Sobic006G137100 Sobic009G240600 Sobic009G240600 Sobic010G239500--Sobic009G240600 Sobic006G116700 Sobic006G116700 Sobic010G239500--Sobic006G116700 Sobic002G176100--Sobic003G319500 Sobic009G111000 Sobic009G111000 Sobic002G176100--Sobic009G111000 Sobic004G141100 Sobic004G141100 Sobic002G176100--Sobic004G141100 Sobic010G008400 Sobic010G008400 Sobic002G176100--Sobic010G008400 Sobic003G417200 Sobic003G417200 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic001G304100 Sobic001G304100 Sobic002G176100--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G176100--Sobic009G188000 Sobic002G046100 Sobic002G046100 Sobic002G345300--Sobic002G046100 Sobic003G350300 Sobic003G350300 Sobic002G345300--Sobic003G350300 Sobic001G281400 Sobic001G281400 Sobic002G345300--Sobic001G281400 Sobic010G178200 Sobic010G178200 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic003G285800 Sobic003G285800 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic001G389000 Sobic001G389000 Sobic004G101300--Sobic001G389000 Sobic004G101300--Sobic002G190900 Sobic004G101300--Sobic007G087200 Sobic003G192100 Sobic003G192100 Sobic004G101300--Sobic003G192100 Sobic010G259600 Sobic010G259600 Sobic004G101300--Sobic010G259600 Sobic004G340900 Sobic004G340900 Sobic004G101300--Sobic004G340900 Sobic005G018700 Sobic005G018700 Sobic004G101300--Sobic005G018700 Sobic004G101300--Sobic009G111000 Sobic009G159400 Sobic009G159400 Sobic004G101300--Sobic009G159400 Sobic003G319500--Sobic002G176100 Sobic003G319500--Sobic003G417200 Sobic003G319500--Sobic009G111000 Sobic002G213600 Sobic002G213600 Sobic003G319500--Sobic002G213600 Sobic003G319500--Sobic001G304100 Sobic001G139100 Sobic001G139100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic005G107900 Sobic005G107900 Sobic003G319500--Sobic005G107900 Sobic003G084400 Sobic003G084400 Sobic003G319500--Sobic003G084400 Sobic003G037800 Sobic003G037800 Sobic003G429000--Sobic003G037800 Sobic003G429000--Sobic005G018700 Sobic001G050100 Sobic001G050100 Sobic003G429000--Sobic001G050100 Sobic003G429000--Sobic001G389000 Sobic002G329000 Sobic002G329000 Sobic003G429000--Sobic002G329000 Sobic002G245100 Sobic002G245100 Sobic003G429000--Sobic002G245100 Sobic003G429000--Sobic009G159400 Sobic007G184600 Sobic007G184600 Sobic003G429000--Sobic007G184600 Sobic003G429000--Sobic002G175100 Sobic002G125700 Sobic002G125700 Sobic007G087200--Sobic002G125700 Sobic007G087200--Sobic010G259600 Sobic009G077800 Sobic009G077800 Sobic007G087200--Sobic009G077800 Sobic001G325400 Sobic001G325400 Sobic007G087200--Sobic001G325400 Sobic009G139400 Sobic009G139400 Sobic007G087200--Sobic009G139400 Sobic003G255200 Sobic003G255200 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic007G087200--Sobic004G101300 Sobic004G107700 Sobic004G107700 Sobic007G087200--Sobic004G107700 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic005G188100--Sobic002G398901 Sobic010G204500 Sobic010G204500 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic007G051000 Sobic007G051000 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic010G012500 Sobic010G012500 Sobic005G188100--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic005G188100--Sobic004G211833 Sobic002G190900--Sobic002G398901 Sobic002G190900--Sobic010G012500 Sobic002G190900--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic002G190900--Sobic009G176000 Sobic002G190900--Sobic002G081600 Sobic002G190900--Sobic005G188100 Sobic002G190900--Sobic001G281400 Sobic002G190900--Sobic004G211833 Sobic002G190900--Sobic001G374700
Octagon: transcription factors


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