Gene annotation
Transcriptome id Sobic.003G113700.1
Synonym Sb03g009570
Functional annotation expressed protein
UniProt C5XFS3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G66654 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os01g15029.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281400 expressed protein -
2 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.002G190900 expressed protein -
4 Sobic.009G139400 expressed protein -
5 Sobic.005G195301 - K02980: RP-S29e, small subunit ribosomal protein S29e
6 Sobic.004G101300 expressed protein -
7 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
8 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
9 Sobic.001G374700 40S ribosomal protein S21, putative, expressed K02971: RP-S21e, small subunit ribosomal protein S21e
10 Sobic.001G107400 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
12 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
13 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
14 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
17 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
18 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
19 Sobic.005G196800 membrane protein, putative, expressed -
20 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -


Gene co-expression network
sample Sobic003G113700 Sobic003G113700 Sobic001G281400 Sobic001G281400 Sobic003G113700--Sobic001G281400 Sobic007G087200 Sobic007G087200 Sobic003G113700--Sobic007G087200 Sobic002G190900 Sobic002G190900 Sobic003G113700--Sobic002G190900 Sobic009G139400 Sobic009G139400 Sobic003G113700--Sobic009G139400 Sobic005G195301 Sobic005G195301 Sobic003G113700--Sobic005G195301 Sobic004G101300 Sobic004G101300 Sobic003G113700--Sobic004G101300 Sobic005G018700 Sobic005G018700 Sobic003G113700--Sobic005G018700 Sobic003G429000 Sobic003G429000 Sobic003G113700--Sobic003G429000 Sobic001G374700 Sobic001G374700 Sobic003G113700--Sobic001G374700 Sobic004G187900 Sobic004G187900 Sobic001G281400--Sobic004G187900 Sobic002G267500 Sobic002G267500 Sobic001G281400--Sobic002G267500 Sobic010G149300 Sobic010G149300 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic001G281400--Sobic002G046100 Sobic010G086200 Sobic010G086200 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic002G125700 Sobic002G125700 Sobic007G087200--Sobic002G125700 Sobic010G259600 Sobic010G259600 Sobic007G087200--Sobic010G259600 Sobic009G077800 Sobic009G077800 Sobic007G087200--Sobic009G077800 Sobic001G325400 Sobic001G325400 Sobic007G087200--Sobic001G325400 Sobic007G087200--Sobic009G139400 Sobic003G255200 Sobic003G255200 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic007G087200--Sobic004G101300 Sobic004G107700 Sobic004G107700 Sobic007G087200--Sobic004G107700 Sobic002G398901 Sobic002G398901 Sobic002G190900--Sobic002G398901 Sobic010G012500 Sobic010G012500 Sobic002G190900--Sobic010G012500 Sobic007G051000 Sobic007G051000 Sobic002G190900--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic002G190900--Sobic009G176000 Sobic002G081600 Sobic002G081600 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic002G190900--Sobic001G281400 Sobic004G211833 Sobic004G211833 Sobic002G190900--Sobic004G211833 Sobic002G190900--Sobic001G374700 Sobic009G139400--Sobic009G077800 Sobic003G297600 Sobic003G297600 Sobic009G139400--Sobic003G297600 Sobic001G119400 Sobic001G119400 Sobic009G139400--Sobic001G119400 Sobic001G177800 Sobic001G177800 Sobic009G139400--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic009G139400--Sobic007G184600 Sobic010G066700 Sobic010G066700 Sobic009G139400--Sobic010G066700 Sobic002G353900 Sobic002G353900 Sobic009G139400--Sobic002G353900 Sobic003G382600 Sobic003G382600 Sobic009G139400--Sobic003G382600 Sobic005G029200 Sobic005G029200 Sobic009G139400--Sobic005G029200 Sobic007G212600 Sobic007G212600 Sobic005G195301--Sobic007G212600 Sobic009G166500 Sobic009G166500 Sobic005G195301--Sobic009G166500 Sobic006G047400 Sobic006G047400 Sobic005G195301--Sobic006G047400 Sobic001G091801 Sobic001G091801 Sobic005G195301--Sobic001G091801 Sobic003G321700 Sobic003G321700 Sobic005G195301--Sobic003G321700 Sobic003G322400 Sobic003G322400 Sobic005G195301--Sobic003G322400 Sobic009G163800 Sobic009G163800 Sobic005G195301--Sobic009G163800 Sobic004G145801 Sobic004G145801 Sobic005G195301--Sobic004G145801 Sobic005G195301--Sobic001G374700 Sobic001G389000 Sobic001G389000 Sobic004G101300--Sobic001G389000 Sobic004G101300--Sobic002G190900 Sobic004G101300--Sobic007G087200 Sobic003G192100 Sobic003G192100 Sobic004G101300--Sobic003G192100 Sobic004G101300--Sobic010G259600 Sobic004G340900 Sobic004G340900 Sobic004G101300--Sobic004G340900 Sobic004G101300--Sobic005G018700 Sobic009G111000 Sobic009G111000 Sobic004G101300--Sobic009G111000 Sobic009G159400 Sobic009G159400 Sobic004G101300--Sobic009G159400 Sobic002G245100 Sobic002G245100 Sobic005G018700--Sobic002G245100 Sobic002G017800 Sobic002G017800 Sobic005G018700--Sobic002G017800 Sobic006G103000 Sobic006G103000 Sobic005G018700--Sobic006G103000 Sobic010G185000 Sobic010G185000 Sobic005G018700--Sobic010G185000 Sobic005G018700--Sobic003G429000 Sobic003G037800 Sobic003G037800 Sobic005G018700--Sobic003G037800 Sobic005G018700--Sobic004G340900 Sobic001G050100 Sobic001G050100 Sobic005G018700--Sobic001G050100 Sobic005G018700--Sobic003G192100 Sobic003G429000--Sobic003G037800 Sobic003G429000--Sobic005G018700 Sobic003G429000--Sobic001G050100 Sobic003G429000--Sobic001G389000 Sobic002G329000 Sobic002G329000 Sobic003G429000--Sobic002G329000 Sobic003G429000--Sobic002G245100 Sobic003G429000--Sobic009G159400 Sobic003G429000--Sobic007G184600 Sobic002G175100 Sobic002G175100 Sobic003G429000--Sobic002G175100 Sobic001G374700--Sobic002G175100 Sobic001G374700--Sobic007G184600 Sobic001G402050 Sobic001G402050 Sobic001G374700--Sobic001G402050 Sobic001G374700--Sobic002G081600 Sobic001G374700--Sobic006G047400 Sobic009G215200 Sobic009G215200 Sobic001G374700--Sobic009G215200 Sobic002G200600 Sobic002G200600 Sobic001G374700--Sobic002G200600 Sobic006G116700 Sobic006G116700 Sobic001G374700--Sobic006G116700 Sobic001G493001 Sobic001G493001 Sobic001G374700--Sobic001G493001
Octagon: transcription factors


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