Gene annotation
Transcriptome id Sobic.008G032100.1
Synonym Sb08g002750
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YRM4
Pfam -
Panther DB PTHR34132 PTHR34132:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58375 : Methyltransferase-related protein
RAP-DB (Rice) LOC_Os11g02200.1 : expressed protein
MaizeGDB (Corn) Zm00025a053838
Brachypodium KQJ89429
Barley HORVU4Hr1G022580.4 , HORVU4Hr1G022580.3 , HORVU4Hr1G022580.2 , HORVU4Hr1G022580.1
Wheat TraesCS4B02G120200 , TraesCS4A02G195200 , TraesCS4D02G118300
Populus -


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cDNA sequences
Sobic.008G032100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
2 Sobic.005G084600 ARGOS, putative, expressed -
3 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
5 Sobic.005G195301 - K02980: RP-S29e, small subunit ribosomal protein S29e
6 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
7 Sobic.009G077800 expressed protein -
8 Sobic.003G113700 expressed protein -
9 Sobic.005G206601 - -
10 Sobic.009G139400 expressed protein -
11 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
12 Sobic.004G101300 expressed protein -
13 Sobic.010G185000 VQ domain containing protein, putative, expressed -
14 Sobic.002G190900 expressed protein -
15 Sobic.001G374700 40S ribosomal protein S21, putative, expressed K02971: RP-S21e, small subunit ribosomal protein S21e
16 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.001G187200 expressed protein -
18 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
19 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C
20 Sobic.005G092900 - -


Gene co-expression network
sample Sobic008G032100 Sobic008G032100 Sobic010G009300 Sobic010G009300 Sobic008G032100--Sobic010G009300 Sobic005G084600 Sobic005G084600 Sobic008G032100--Sobic005G084600 Sobic007G087200 Sobic007G087200 Sobic008G032100--Sobic007G087200 Sobic001G177800 Sobic001G177800 Sobic008G032100--Sobic001G177800 Sobic005G195301 Sobic005G195301 Sobic008G032100--Sobic005G195301 Sobic002G187500 Sobic002G187500 Sobic008G032100--Sobic002G187500 Sobic009G077800 Sobic009G077800 Sobic008G032100--Sobic009G077800 Sobic003G113700 Sobic003G113700 Sobic008G032100--Sobic003G113700 Sobic005G206601 Sobic005G206601 Sobic008G032100--Sobic005G206601 Sobic010G009300--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic010G009300--Sobic007G184600 Sobic009G139400 Sobic009G139400 Sobic010G009300--Sobic009G139400 Sobic010G009300--Sobic002G187500 Sobic002G190900 Sobic002G190900 Sobic010G009300--Sobic002G190900 Sobic001G252300 Sobic001G252300 Sobic010G009300--Sobic001G252300 Sobic010G009300--Sobic009G077800 Sobic006G099900 Sobic006G099900 Sobic010G009300--Sobic006G099900 Sobic004G107700 Sobic004G107700 Sobic010G009300--Sobic004G107700 Sobic004G176600 Sobic004G176600 Sobic005G084600--Sobic004G176600 Sobic001G339700 Sobic001G339700 Sobic005G084600--Sobic001G339700 Sobic009G120000 Sobic009G120000 Sobic005G084600--Sobic009G120000 Sobic005G084600--Sobic008G032100 Sobic005G084600--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic005G084600--Sobic002G375400 Sobic005G084600--Sobic010G009300 Sobic010G185000 Sobic010G185000 Sobic005G084600--Sobic010G185000 Sobic003G417800 Sobic003G417800 Sobic005G084600--Sobic003G417800 Sobic002G125700 Sobic002G125700 Sobic007G087200--Sobic002G125700 Sobic010G259600 Sobic010G259600 Sobic007G087200--Sobic010G259600 Sobic007G087200--Sobic009G077800 Sobic001G325400 Sobic001G325400 Sobic007G087200--Sobic001G325400 Sobic007G087200--Sobic009G139400 Sobic003G255200 Sobic003G255200 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic004G101300 Sobic004G101300 Sobic007G087200--Sobic004G101300 Sobic007G087200--Sobic004G107700 Sobic001G177800--Sobic007G184600 Sobic001G177800--Sobic009G139400 Sobic001G374700 Sobic001G374700 Sobic001G177800--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic001G177800--Sobic001G402050 Sobic007G227300 Sobic007G227300 Sobic001G177800--Sobic007G227300 Sobic002G200600 Sobic002G200600 Sobic001G177800--Sobic002G200600 Sobic004G189400 Sobic004G189400 Sobic001G177800--Sobic004G189400 Sobic001G177800--Sobic006G099900 Sobic001G177800--Sobic010G009300 Sobic007G212600 Sobic007G212600 Sobic005G195301--Sobic007G212600 Sobic009G166500 Sobic009G166500 Sobic005G195301--Sobic009G166500 Sobic006G047400 Sobic006G047400 Sobic005G195301--Sobic006G047400 Sobic001G091801 Sobic001G091801 Sobic005G195301--Sobic001G091801 Sobic003G321700 Sobic003G321700 Sobic005G195301--Sobic003G321700 Sobic003G322400 Sobic003G322400 Sobic005G195301--Sobic003G322400 Sobic009G163800 Sobic009G163800 Sobic005G195301--Sobic009G163800 Sobic004G145801 Sobic004G145801 Sobic005G195301--Sobic004G145801 Sobic005G195301--Sobic001G374700 Sobic002G187500--Sobic010G009300 Sobic003G285800 Sobic003G285800 Sobic002G187500--Sobic003G285800 Sobic002G187500--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic002G187500--Sobic002G046100 Sobic003G072300 Sobic003G072300 Sobic002G187500--Sobic003G072300 Sobic002G187500--Sobic001G177800 Sobic002G081600 Sobic002G081600 Sobic002G187500--Sobic002G081600 Sobic001G281400 Sobic001G281400 Sobic002G187500--Sobic001G281400 Sobic003G393700 Sobic003G393700 Sobic002G187500--Sobic003G393700 Sobic003G297600 Sobic003G297600 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic002G055700 Sobic002G055700 Sobic009G077800--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic009G077800--Sobic001G325400 Sobic009G077800--Sobic007G087200 Sobic003G113700--Sobic001G281400 Sobic003G113700--Sobic007G087200 Sobic003G113700--Sobic002G190900 Sobic003G113700--Sobic009G139400 Sobic003G113700--Sobic005G195301 Sobic003G113700--Sobic004G101300 Sobic005G018700 Sobic005G018700 Sobic003G113700--Sobic005G018700 Sobic003G429000 Sobic003G429000 Sobic003G113700--Sobic003G429000 Sobic003G113700--Sobic001G374700 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic003G117600 Sobic003G117600 Sobic005G206601--Sobic003G117600 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic009G240600 Sobic009G240600 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800
Octagon: transcription factors


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