Gene annotation
Transcriptome id Sobic.003G400200.1
Synonym Sb03g043660
Functional annotation plant-specific domain TIGR01615 family protein, expressed
UniProt C5XG65
Pfam PF04720
Panther DB PTHR31579 PTHR31579:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07350 : Protein of unknown function (DUF506)
RAP-DB (Rice) LOC_Os01g68650.1 : plant-specific domain TIGR01615 family protein, expressed
MaizeGDB (Corn) Zm00025a039353 , Zm00025a026308
Brachypodium KQK11174
Barley HORVU3Hr1G093260.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G279700 expressed protein -
2 Sobic.006G269250 - -
3 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
4 Sobic.001G225200 expressed protein -
5 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
6 Sobic.001G225600 expressed protein -
7 Sobic.001G225300 - -
8 Sobic.002G254200 expressed protein -
9 Sobic.008G036900 MYB family transcription factor, putative, expressed -
10 Sobic.006G241350 - -
11 Sobic.003G290300 expressed protein -
12 Sobic.003G395400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@BTBZ2 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -
13 Sobic.006G206000 WRKY68, expressed -
14 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
15 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
16 Sobic.008G135600 osmotin, putative, expressed -
17 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
18 Sobic.003G271201 - -
19 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
20 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -


Gene co-expression network
sample Sobic003G400200 Sobic003G400200 Sobic004G279700 Sobic004G279700 Sobic003G400200--Sobic004G279700 Sobic006G269250 Sobic006G269250 Sobic003G400200--Sobic006G269250 Sobic006G241400 Sobic006G241400 Sobic003G400200--Sobic006G241400 Sobic001G225200 Sobic001G225200 Sobic003G400200--Sobic001G225200 Sobic002G421600 Sobic002G421600 Sobic003G400200--Sobic002G421600 Sobic001G225600 Sobic001G225600 Sobic003G400200--Sobic001G225600 Sobic001G225300 Sobic001G225300 Sobic003G400200--Sobic001G225300 Sobic002G254200 Sobic002G254200 Sobic003G400200--Sobic002G254200 Sobic008G036900 Sobic008G036900 Sobic003G400200--Sobic008G036900 Sobic004G279700--Sobic003G400200 Sobic004G279700--Sobic006G241400 Sobic004G279700--Sobic002G254200 Sobic006G241350 Sobic006G241350 Sobic004G279700--Sobic006G241350 Sobic003G290300 Sobic003G290300 Sobic004G279700--Sobic003G290300 Sobic004G279700--Sobic002G421600 Sobic004G279700--Sobic001G225200 Sobic004G279700--Sobic001G225300 Sobic006G191600 Sobic006G191600 Sobic004G279700--Sobic006G191600 Sobic006G269250--Sobic003G400200 Sobic006G269250--Sobic001G225200 Sobic006G101300 Sobic006G101300 Sobic006G269250--Sobic006G101300 Sobic003G418500 Sobic003G418500 Sobic006G269250--Sobic003G418500 Sobic006G234900 Sobic006G234900 Sobic006G269250--Sobic006G234900 Sobic008G066200 Sobic008G066200 Sobic006G269250--Sobic008G066200 Sobic004G109900 Sobic004G109900 Sobic006G269250--Sobic004G109900 Sobic010G166500 Sobic010G166500 Sobic006G269250--Sobic010G166500 Sobic008G022000 Sobic008G022000 Sobic006G269250--Sobic008G022000 Sobic006G241400--Sobic004G279700 Sobic006G241400--Sobic006G241350 Sobic006G241400--Sobic003G400200 Sobic006G241600 Sobic006G241600 Sobic006G241400--Sobic006G241600 Sobic006G241400--Sobic002G421600 Sobic007G126100 Sobic007G126100 Sobic006G241400--Sobic007G126100 Sobic006G241400--Sobic008G036900 Sobic003G395400 Sobic003G395400 Sobic006G241400--Sobic003G395400 Sobic006G241400--Sobic002G254200 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic006G157500 Sobic006G157500 Sobic001G225200--Sobic006G157500 Sobic001G225200--Sobic006G191600 Sobic003G406900 Sobic003G406900 Sobic001G225200--Sobic003G406900 Sobic006G269200 Sobic006G269200 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic006G154500 Sobic006G154500 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic002G421600--Sobic007G126100 Sobic002G421600--Sobic006G269200 Sobic002G421600--Sobic007G177100 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic003G293900 Sobic003G293900 Sobic002G421600--Sobic003G293900 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic002G421600--Sobic006G241600 Sobic001G225600--Sobic001G225300 Sobic001G530350 Sobic001G530350 Sobic001G225600--Sobic001G530350 Sobic003G013600 Sobic003G013600 Sobic001G225600--Sobic003G013600 Sobic009G100800 Sobic009G100800 Sobic001G225600--Sobic009G100800 Sobic003G123300 Sobic003G123300 Sobic001G225600--Sobic003G123300 Sobic001G225600--Sobic001G225200 Sobic003G299800 Sobic003G299800 Sobic001G225600--Sobic003G299800 Sobic001G225600--Sobic003G400200 Sobic001G225600--Sobic002G421600 Sobic001G225300--Sobic001G225200 Sobic001G225300--Sobic002G254200 Sobic001G225300--Sobic006G154500 Sobic001G225300--Sobic006G269200 Sobic001G225300--Sobic003G406900 Sobic004G161751 Sobic004G161751 Sobic001G225300--Sobic004G161751 Sobic010G175800 Sobic010G175800 Sobic001G225300--Sobic010G175800 Sobic001G225300--Sobic001G225600 Sobic009G064000 Sobic009G064000 Sobic001G225300--Sobic009G064000 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic002G254200--Sobic007G126100 Sobic010G003700 Sobic010G003700 Sobic008G036900--Sobic010G003700 Sobic008G036900--Sobic001G225200 Sobic001G328800 Sobic001G328800 Sobic008G036900--Sobic001G328800 Sobic006G206000 Sobic006G206000 Sobic008G036900--Sobic006G206000 Sobic008G036900--Sobic006G157500 Sobic008G036900--Sobic006G241400 Sobic001G282100 Sobic001G282100 Sobic008G036900--Sobic001G282100 Sobic009G016201 Sobic009G016201 Sobic008G036900--Sobic009G016201 Sobic008G036900--Sobic007G126100
Octagon: transcription factors


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