Gene annotation
Transcriptome id Sobic.006G241350.1
Synonym -
Functional annotation -
UniProt A0A1Z5RG14
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g55610.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
2 Sobic.004G279700 expressed protein -
3 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
4 Sobic.006G241600 expressed protein -
5 Sobic.007G028700 LSD1 zinc finger domain containing protein, expressed -
6 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
8 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
9 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
11 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
12 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
13 Sobic.001G225100 expressed protein -
14 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
15 Sobic.006G051100 expressed protein -
16 Sobic.002G016300 MYB family transcription factor, putative, expressed -
17 Sobic.007G154701 - -
18 Sobic.003G320600 membrane protein, putative, expressed -
19 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
20 Sobic.003G147401 - -


Gene co-expression network
sample Sobic006G241350 Sobic006G241350 Sobic006G241400 Sobic006G241400 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic004G325900 Sobic004G325900 Sobic006G241350--Sobic004G325900 Sobic006G241600 Sobic006G241600 Sobic006G241350--Sobic006G241600 Sobic007G028700 Sobic007G028700 Sobic006G241350--Sobic007G028700 Sobic002G367700 Sobic002G367700 Sobic006G241350--Sobic002G367700 Sobic001G078900 Sobic001G078900 Sobic006G241350--Sobic001G078900 Sobic003G123300 Sobic003G123300 Sobic006G241350--Sobic003G123300 Sobic001G465100 Sobic001G465100 Sobic006G241350--Sobic001G465100 Sobic006G241400--Sobic004G279700 Sobic006G241400--Sobic006G241350 Sobic003G400200 Sobic003G400200 Sobic006G241400--Sobic003G400200 Sobic006G241400--Sobic006G241600 Sobic002G421600 Sobic002G421600 Sobic006G241400--Sobic002G421600 Sobic007G126100 Sobic007G126100 Sobic006G241400--Sobic007G126100 Sobic008G036900 Sobic008G036900 Sobic006G241400--Sobic008G036900 Sobic003G395400 Sobic003G395400 Sobic006G241400--Sobic003G395400 Sobic002G254200 Sobic002G254200 Sobic006G241400--Sobic002G254200 Sobic004G279700--Sobic003G400200 Sobic004G279700--Sobic006G241400 Sobic004G279700--Sobic002G254200 Sobic004G279700--Sobic006G241350 Sobic003G290300 Sobic003G290300 Sobic004G279700--Sobic003G290300 Sobic004G279700--Sobic002G421600 Sobic001G225200 Sobic001G225200 Sobic004G279700--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic004G279700--Sobic001G225300 Sobic006G191600 Sobic006G191600 Sobic004G279700--Sobic006G191600 Sobic004G325900--Sobic001G078900 Sobic007G154701 Sobic007G154701 Sobic004G325900--Sobic007G154701 Sobic004G325900--Sobic006G241350 Sobic004G325900--Sobic001G465100 Sobic003G147401 Sobic003G147401 Sobic004G325900--Sobic003G147401 Sobic004G325900--Sobic003G123300 Sobic004G325900--Sobic006G241600 Sobic003G379700 Sobic003G379700 Sobic004G325900--Sobic003G379700 Sobic001G032100 Sobic001G032100 Sobic004G325900--Sobic001G032100 Sobic006G241600--Sobic006G241400 Sobic006G241600--Sobic006G241350 Sobic006G241600--Sobic007G126100 Sobic006G241600--Sobic002G421600 Sobic003G000800 Sobic003G000800 Sobic006G241600--Sobic003G000800 Sobic001G247400 Sobic001G247400 Sobic006G241600--Sobic001G247400 Sobic006G241600--Sobic001G032100 Sobic001G149700 Sobic001G149700 Sobic006G241600--Sobic001G149700 Sobic001G225100 Sobic001G225100 Sobic006G241600--Sobic001G225100 Sobic007G028700--Sobic006G241350 Sobic007G028700--Sobic001G465100 Sobic007G028700--Sobic002G367700 Sobic007G028700--Sobic004G325900 Sobic007G028700--Sobic001G032100 Sobic004G221900 Sobic004G221900 Sobic007G028700--Sobic004G221900 Sobic007G028700--Sobic001G247400 Sobic003G296600 Sobic003G296600 Sobic007G028700--Sobic003G296600 Sobic007G028700--Sobic001G078900 Sobic002G367700--Sobic006G241350 Sobic002G367700--Sobic003G123300 Sobic002G367700--Sobic001G078900 Sobic006G051100 Sobic006G051100 Sobic002G367700--Sobic006G051100 Sobic002G367700--Sobic001G465100 Sobic002G367700--Sobic004G325900 Sobic002G016300 Sobic002G016300 Sobic002G367700--Sobic002G016300 Sobic002G367700--Sobic007G028700 Sobic002G367700--Sobic006G241400 Sobic001G078900--Sobic004G325900 Sobic001G078900--Sobic001G465100 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic001G078900--Sobic002G367700 Sobic001G078900--Sobic003G123300 Sobic003G178700 Sobic003G178700 Sobic001G078900--Sobic003G178700 Sobic001G078900--Sobic003G147401 Sobic002G380400 Sobic002G380400 Sobic001G078900--Sobic002G380400 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic001G465100--Sobic003G123300 Sobic001G465100--Sobic001G078900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900
Octagon: transcription factors


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