Gene annotation
Transcriptome id Sobic.006G051100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PKA7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g31760.1 : expressed protein
MaizeGDB (Corn) Zm00025a011771
Brachypodium -
Barley -
Wheat TraesCS2D02G282100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G320600 membrane protein, putative, expressed -
2 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
3 Sobic.001G093600 - -
4 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
5 Sobic.006G279700 POT family protein, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.001G225500 expressed protein -
9 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
10 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
11 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
12 Sobic.006G241350 - -
13 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G376700 EF hand family protein, putative -
15 Sobic.008G015300 amino acid permease family protein, putative, expressed -
16 Sobic.002G016300 MYB family transcription factor, putative, expressed -
17 Sobic.007G179750 - -
18 Sobic.003G013600 expressed protein -
19 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
20 Sobic.001G141300 RNA recognition motif containing protein, expressed -


Gene co-expression network
sample Sobic006G051100 Sobic006G051100 Sobic003G320600 Sobic003G320600 Sobic006G051100--Sobic003G320600 Sobic003G123300 Sobic003G123300 Sobic006G051100--Sobic003G123300 Sobic001G093600 Sobic001G093600 Sobic006G051100--Sobic001G093600 Sobic003G107300 Sobic003G107300 Sobic006G051100--Sobic003G107300 Sobic006G279700 Sobic006G279700 Sobic006G051100--Sobic006G279700 Sobic003G178700 Sobic003G178700 Sobic006G051100--Sobic003G178700 Sobic002G367700 Sobic002G367700 Sobic006G051100--Sobic002G367700 Sobic001G225500 Sobic001G225500 Sobic006G051100--Sobic001G225500 Sobic001G191200 Sobic001G191200 Sobic006G051100--Sobic001G191200 Sobic003G320600--Sobic006G051100 Sobic002G376700 Sobic002G376700 Sobic003G320600--Sobic002G376700 Sobic001G225400 Sobic001G225400 Sobic003G320600--Sobic001G225400 Sobic003G320600--Sobic001G225500 Sobic003G013600 Sobic003G013600 Sobic003G320600--Sobic003G013600 Sobic003G320600--Sobic003G123300 Sobic001G465100 Sobic001G465100 Sobic003G320600--Sobic001G465100 Sobic006G241350 Sobic006G241350 Sobic003G320600--Sobic006G241350 Sobic003G320600--Sobic001G191200 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic001G093600--Sobic003G107300 Sobic006G273000 Sobic006G273000 Sobic001G093600--Sobic006G273000 Sobic001G005500 Sobic001G005500 Sobic001G093600--Sobic001G005500 Sobic001G275200 Sobic001G275200 Sobic001G093600--Sobic001G275200 Sobic003G255100 Sobic003G255100 Sobic001G093600--Sobic003G255100 Sobic007G179750 Sobic007G179750 Sobic001G093600--Sobic007G179750 Sobic003G284300 Sobic003G284300 Sobic001G093600--Sobic003G284300 Sobic007G191900 Sobic007G191900 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic003G107300--Sobic001G093600 Sobic009G154600 Sobic009G154600 Sobic003G107300--Sobic009G154600 Sobic003G107300--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic003G107300--Sobic003G406700 Sobic003G026700 Sobic003G026700 Sobic003G107300--Sobic003G026700 Sobic003G107300--Sobic003G255100 Sobic003G107300--Sobic001G005500 Sobic009G213400 Sobic009G213400 Sobic003G107300--Sobic009G213400 Sobic003G222300 Sobic003G222300 Sobic003G107300--Sobic003G222300 Sobic006G279700--Sobic006G051100 Sobic001G423100 Sobic001G423100 Sobic006G279700--Sobic001G423100 Sobic006G279700--Sobic001G191200 Sobic001G141300 Sobic001G141300 Sobic006G279700--Sobic001G141300 Sobic001G078200 Sobic001G078200 Sobic006G279700--Sobic001G078200 Sobic006G279800 Sobic006G279800 Sobic006G279700--Sobic006G279800 Sobic006G279700--Sobic009G154600 Sobic006G279700--Sobic009G213400 Sobic006G279700--Sobic003G107300 Sobic008G015300 Sobic008G015300 Sobic003G178700--Sobic008G015300 Sobic003G163500 Sobic003G163500 Sobic003G178700--Sobic003G163500 Sobic005G046500 Sobic005G046500 Sobic003G178700--Sobic005G046500 Sobic009G002500 Sobic009G002500 Sobic003G178700--Sobic009G002500 Sobic008G101500 Sobic008G101500 Sobic003G178700--Sobic008G101500 Sobic008G118000 Sobic008G118000 Sobic003G178700--Sobic008G118000 Sobic005G076000 Sobic005G076000 Sobic003G178700--Sobic005G076000 Sobic007G129100 Sobic007G129100 Sobic003G178700--Sobic007G129100 Sobic003G178700--Sobic009G213400 Sobic002G367700--Sobic006G241350 Sobic002G367700--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic002G367700--Sobic001G078900 Sobic002G367700--Sobic006G051100 Sobic002G367700--Sobic001G465100 Sobic004G325900 Sobic004G325900 Sobic002G367700--Sobic004G325900 Sobic002G016300 Sobic002G016300 Sobic002G367700--Sobic002G016300 Sobic007G028700 Sobic007G028700 Sobic002G367700--Sobic007G028700 Sobic006G241400 Sobic006G241400 Sobic002G367700--Sobic006G241400 Sobic001G225500--Sobic001G225400 Sobic001G377000 Sobic001G377000 Sobic001G225500--Sobic001G377000 Sobic001G225500--Sobic001G191200 Sobic001G225500--Sobic003G406700 Sobic010G172200 Sobic010G172200 Sobic001G225500--Sobic010G172200 Sobic010G246600 Sobic010G246600 Sobic001G225500--Sobic010G246600 Sobic001G225500--Sobic009G213400 Sobic001G225500--Sobic007G179750 Sobic001G225500--Sobic003G320600 Sobic001G191200--Sobic003G406700 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G191200--Sobic001G225500
Octagon: transcription factors


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