Gene annotation
Transcriptome id Sobic.001G078200.2,Sobic.001G078200.1
Synonym MEE14, Sb01g007070
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WZA2 , A0A1B6QHT1
Pfam -
Panther DB PTHR36345 PTHR36345:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15890 : maternal effect embryo arrest 14
RAP-DB (Rice) LOC_Os03g55670.1 : expressed protein
MaizeGDB (Corn) Zm00025a016722 , Zm00025a008304
Brachypodium -
Barley HORVU5Hr1G097730.1 , HORVU5Hr1G097730.2
Wheat TraesCS5D02G412400 , TraesCS5A02G402300 , TraesCS5B02G407200
Populus -


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cDNA sequences
Sobic.001G078200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
2 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
4 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
5 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
7 Sobic.003G406700 expressed protein -
8 Sobic.009G159700 expressed protein -
9 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
10 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
11 Sobic.001G377000 auxin-repressed protein, putative, expressed -
12 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
13 Sobic.006G279800 expressed protein -
14 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
15 Sobic.001G141300 RNA recognition motif containing protein, expressed -
16 Sobic.006G152600 - -
17 Sobic.003G034400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger/CCCH transcription factor, putative, expressed -
18 Sobic.003G013600 expressed protein -
19 Sobic.001G225500 expressed protein -
20 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -


Gene co-expression network
sample Sobic001G078200 Sobic001G078200 Sobic001G191200 Sobic001G191200 Sobic001G078200--Sobic001G191200 Sobic005G085200 Sobic005G085200 Sobic001G078200--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic001G078200--Sobic010G057300 Sobic004G285800 Sobic004G285800 Sobic001G078200--Sobic004G285800 Sobic005G085600 Sobic005G085600 Sobic001G078200--Sobic005G085600 Sobic001G423100 Sobic001G423100 Sobic001G078200--Sobic001G423100 Sobic003G406700 Sobic003G406700 Sobic001G078200--Sobic003G406700 Sobic009G159700 Sobic009G159700 Sobic001G078200--Sobic009G159700 Sobic009G213400 Sobic009G213400 Sobic001G078200--Sobic009G213400 Sobic001G191200--Sobic003G406700 Sobic001G191200--Sobic001G078200 Sobic009G154600 Sobic009G154600 Sobic001G191200--Sobic009G154600 Sobic001G377000 Sobic001G377000 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic001G191200--Sobic005G085200 Sobic003G107300 Sobic003G107300 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic004G345900 Sobic004G345900 Sobic005G085200--Sobic004G345900 Sobic007G189800 Sobic007G189800 Sobic005G085200--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic005G085200--Sobic004G199600 Sobic010G057400 Sobic010G057400 Sobic005G085200--Sobic010G057400 Sobic005G085200--Sobic009G159700 Sobic009G078500 Sobic009G078500 Sobic005G085200--Sobic009G078500 Sobic005G085200--Sobic004G285800 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic010G057300--Sobic004G199600 Sobic009G180100 Sobic009G180100 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800 Sobic004G285800--Sobic010G057300 Sobic004G285800--Sobic005G085200 Sobic004G285800--Sobic009G159700 Sobic004G285800--Sobic005G085600 Sobic004G285800--Sobic001G078200 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic004G285800--Sobic010G057400 Sobic005G085600--Sobic005G085200 Sobic005G085600--Sobic007G189800 Sobic001G032100 Sobic001G032100 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic005G085600--Sobic004G199600 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300 Sobic001G423100--Sobic009G154600 Sobic008G148400 Sobic008G148400 Sobic001G423100--Sobic008G148400 Sobic001G423100--Sobic001G191200 Sobic001G423100--Sobic003G406700 Sobic001G423100--Sobic001G078200 Sobic001G031300 Sobic001G031300 Sobic001G423100--Sobic001G031300 Sobic006G279800 Sobic006G279800 Sobic001G423100--Sobic006G279800 Sobic010G258300 Sobic010G258300 Sobic001G423100--Sobic010G258300 Sobic003G030400 Sobic003G030400 Sobic001G423100--Sobic003G030400 Sobic003G406700--Sobic001G191200 Sobic003G406700--Sobic001G377000 Sobic003G406700--Sobic009G154600 Sobic003G406700--Sobic003G107300 Sobic003G406700--Sobic001G423100 Sobic003G406700--Sobic001G225500 Sobic003G406700--Sobic006G279800 Sobic003G406700--Sobic001G031300 Sobic002G331000 Sobic002G331000 Sobic003G406700--Sobic002G331000 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G166801 Sobic009G166801 Sobic009G159700--Sobic009G166801 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic009G159700--Sobic004G345900 Sobic009G159700--Sobic010G057400 Sobic010G245100 Sobic010G245100 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic006G273000 Sobic006G273000 Sobic009G213400--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic009G213400--Sobic003G222300 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic001G093600 Sobic001G093600 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500
Octagon: transcription factors


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