Gene annotation
Transcriptome id Sobic.009G159700.1
Synonym Sb09g022260
Functional annotation expressed protein
UniProt C5YZ68
Pfam -
Panther DB PTHR33738 PTHR33738:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02020 : -
RAP-DB (Rice) LOC_Os05g38040.4 : expressed protein
MaizeGDB (Corn) Zm00025a043879 , Zm00025a037191
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G159700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
4 Sobic.009G166801 - -
5 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
6 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.006G241200 expressed protein -
8 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
9 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
10 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
12 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
13 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
15 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
16 Sobic.009G064766 - -
17 Sobic.004G315100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
18 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
19 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic009G159700 Sobic009G159700 Sobic005G085200 Sobic005G085200 Sobic009G159700--Sobic005G085200 Sobic005G085600 Sobic005G085600 Sobic009G159700--Sobic005G085600 Sobic004G285800 Sobic004G285800 Sobic009G159700--Sobic004G285800 Sobic009G166801 Sobic009G166801 Sobic009G159700--Sobic009G166801 Sobic010G057300 Sobic010G057300 Sobic009G159700--Sobic010G057300 Sobic007G189800 Sobic007G189800 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic004G345900 Sobic004G345900 Sobic009G159700--Sobic004G345900 Sobic010G057400 Sobic010G057400 Sobic009G159700--Sobic010G057400 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic005G085200--Sobic004G199600 Sobic005G085200--Sobic010G057400 Sobic005G085200--Sobic009G159700 Sobic009G078500 Sobic009G078500 Sobic005G085200--Sobic009G078500 Sobic005G085200--Sobic004G285800 Sobic005G085600--Sobic005G085200 Sobic005G085600--Sobic007G189800 Sobic001G032100 Sobic001G032100 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic001G363100 Sobic001G363100 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic005G085600--Sobic004G199600 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300 Sobic004G285800--Sobic010G057300 Sobic004G285800--Sobic005G085200 Sobic004G285800--Sobic009G159700 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic009G180100 Sobic009G180100 Sobic004G285800--Sobic009G180100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic004G285800--Sobic010G057400 Sobic009G166801--Sobic009G159700 Sobic009G030100 Sobic009G030100 Sobic009G166801--Sobic009G030100 Sobic009G166801--Sobic004G285800 Sobic010G110700 Sobic010G110700 Sobic009G166801--Sobic010G110700 Sobic001G341300 Sobic001G341300 Sobic009G166801--Sobic001G341300 Sobic003G293900 Sobic003G293900 Sobic009G166801--Sobic003G293900 Sobic002G338300 Sobic002G338300 Sobic009G166801--Sobic002G338300 Sobic009G166801--Sobic005G085600 Sobic006G269200 Sobic006G269200 Sobic009G166801--Sobic006G269200 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic010G057300--Sobic004G199600 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic007G189800--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic007G189800--Sobic010G146200 Sobic008G124100 Sobic008G124100 Sobic007G189800--Sobic008G124100 Sobic009G064766 Sobic009G064766 Sobic007G189800--Sobic009G064766 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic010G270900 Sobic010G270900 Sobic006G241200--Sobic010G270900 Sobic006G241200--Sobic009G159700 Sobic008G013900 Sobic008G013900 Sobic006G241200--Sobic008G013900 Sobic006G241200--Sobic005G085200 Sobic002G279100 Sobic002G279100 Sobic006G241200--Sobic002G279100 Sobic004G216700 Sobic004G216700 Sobic006G241200--Sobic004G216700 Sobic006G241200--Sobic007G189800 Sobic009G162401 Sobic009G162401 Sobic006G241200--Sobic009G162401 Sobic009G197000 Sobic009G197000 Sobic006G241200--Sobic009G197000 Sobic004G345900--Sobic010G057400 Sobic004G345900--Sobic005G085200 Sobic004G345900--Sobic010G057300 Sobic004G345900--Sobic001G277000 Sobic004G345900--Sobic007G189800 Sobic004G345900--Sobic004G199600 Sobic002G213800 Sobic002G213800 Sobic004G345900--Sobic002G213800 Sobic004G345900--Sobic010G270300 Sobic004G345900--Sobic010G146200 Sobic010G057400--Sobic004G345900 Sobic010G057400--Sobic010G057300 Sobic010G057400--Sobic005G085200 Sobic010G057400--Sobic004G199600 Sobic010G057400--Sobic010G270300 Sobic010G057400--Sobic007G189800 Sobic010G057400--Sobic001G277000 Sobic010G057400--Sobic010G146200 Sobic010G057400--Sobic009G078500
Octagon: transcription factors


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