Gene annotation
| Transcriptome id | Sobic.007G189800.1 |
|---|---|
| Synonym | SbBBX15;B-box (BBX) protein, SbBBX15, B-box (BBX) protein, Sb07g025940 |
| Functional annotation | B-box (BBX) protein (PubMedID : 30626335) SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) CCT/B-box zinc finger protein, putative, expressed |
| UniProt | C5YHP5 |
| Pfam | PF06203 |
| Panther DB | PTHR31717 PTHR31717:SF3 |
| NCBI CDD | KOG1601; GATA-4/5/6 transcription factors |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT1G28050 : B-box type zinc finger protein with CCT domain |
|---|---|
| RAP-DB (Rice) | LOC_Os08g42440.1 : CCT/B-box zinc finger protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a005308 |
| Brachypodium | KQJ99163 |
| Barley | HORVU0Hr1G021050.3 , HORVU0Hr1G021050.4 , HORVU0Hr1G021050.5 , HORVU0Hr1G021050.6 |
| Wheat | TraesCS7D02G264300 , TraesCS4D02G167300 , TraesCS4D02G167300 , TraesCS7A02G263500 , TraesCS7B02G161500 , TraesCS4D02G167300 , TraesCS4A02G140600 , TraesCS4A02G140600 , TraesCS4A02G140600 , TraesCS4A02G140600 , TraesCS4A02G140600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G277000 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed | K00430: peroxidase |
| 2 | Sobic.010G146200 | homeobox associated leucine zipper, putative, expressed | - |
| 3 | Sobic.008G124100 | - | - |
| 4 | Sobic.009G064766 | - | - |
| 5 | Sobic.005G085600 | OsFBK25 - F-box domain and kelch repeat containing protein, expressed | - |
| 6 | Sobic.005G085200 | OsFBK25 - F-box domain and kelch repeat containing protein, expressed | - |
| 7 | Sobic.005G003200 | sugar-responsive gene(PubMedID : 25496467)@asparagine synthetase, putative, expressed | K01953: asnB, asparagine synthase (glutamine-hydrolysing) |
| 8 | Sobic.009G078500 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 9 | Sobic.006G249000 | cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed | K04733: interleukin-1 receptor-associated kinase 4 |
| 10 | Sobic.004G199600 | DUF581 domain containing protein, expressed | - |
| 11 | Sobic.004G345900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed | - |
| 12 | Sobic.003G176100 | expressed protein | - |
| 13 | Sobic.003G400266 | - | - |
| 14 | Sobic.001G363100 | universal stress protein domain containing protein, putative, expressed | - |
| 15 | Sobic.005G130100 | terpene synthase, putative, expressed | K15803: (-)-germacrene D synthase |
| 16 | Sobic.010G057400 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed | K06617: raffinose synthase |
| 17 | Sobic.010G057300 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed | K06617: raffinose synthase |
| 18 | Sobic.006G020600 | 3-ketoacyl-CoA synthase 6, putative, expressed | - |
| 19 | Sobic.003G148700 | powdery mildew resistant protein 5, putative, expressed | - |
| 20 | Sobic.010G050600 | - | - |
Gene co-expression network
Octagon: transcription factors
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