Gene annotation
Transcriptome id Sobic.008G124100.1
Synonym
Functional annotation -
UniProt C5YPK7
Pfam PF03784
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006952; defense response


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.009G064766 - -
3 Sobic.008G013900 O-methyltransferase, putative, expressed -
4 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.003G176100 expressed protein -
6 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
7 Sobic.006G020600 3-ketoacyl-CoA synthase 6, putative, expressed -
8 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
9 Sobic.001G164200 cytochrome P450, putative, expressed -
10 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.007G129401 - -
12 Sobic.004G199600 DUF581 domain containing protein, expressed -
13 Sobic.008G108900 GRF zinc finger family protein, expressed -
14 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
15 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
16 Sobic.009G196700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.007G059300 - -
18 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
19 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
20 Sobic.009G109450 - -


Gene co-expression network
sample Sobic008G124100 Sobic008G124100 Sobic001G277000 Sobic001G277000 Sobic008G124100--Sobic001G277000 Sobic009G064766 Sobic009G064766 Sobic008G124100--Sobic009G064766 Sobic008G013900 Sobic008G013900 Sobic008G124100--Sobic008G013900 Sobic007G189800 Sobic007G189800 Sobic008G124100--Sobic007G189800 Sobic003G176100 Sobic003G176100 Sobic008G124100--Sobic003G176100 Sobic010G146200 Sobic010G146200 Sobic008G124100--Sobic010G146200 Sobic006G020600 Sobic006G020600 Sobic008G124100--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic008G124100--Sobic002G051400 Sobic001G164200 Sobic001G164200 Sobic008G124100--Sobic001G164200 Sobic001G277000--Sobic008G124100 Sobic001G277000--Sobic007G189800 Sobic001G277000--Sobic009G064766 Sobic004G345900 Sobic004G345900 Sobic001G277000--Sobic004G345900 Sobic009G078500 Sobic009G078500 Sobic001G277000--Sobic009G078500 Sobic002G213800 Sobic002G213800 Sobic001G277000--Sobic002G213800 Sobic004G199600 Sobic004G199600 Sobic001G277000--Sobic004G199600 Sobic005G085200 Sobic005G085200 Sobic001G277000--Sobic005G085200 Sobic001G277000--Sobic010G146200 Sobic009G064766--Sobic001G277000 Sobic009G064766--Sobic008G124100 Sobic009G064766--Sobic009G078500 Sobic009G064766--Sobic007G189800 Sobic009G064766--Sobic010G146200 Sobic009G064766--Sobic003G176100 Sobic010G270300 Sobic010G270300 Sobic009G064766--Sobic010G270300 Sobic005G130100 Sobic005G130100 Sobic009G064766--Sobic005G130100 Sobic009G064766--Sobic004G199600 Sobic008G013900--Sobic001G164200 Sobic001G182300 Sobic001G182300 Sobic008G013900--Sobic001G182300 Sobic008G013900--Sobic008G124100 Sobic003G219000 Sobic003G219000 Sobic008G013900--Sobic003G219000 Sobic007G129401 Sobic007G129401 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic008G013900--Sobic003G176100 Sobic010G143400 Sobic010G143400 Sobic008G013900--Sobic010G143400 Sobic007G189800--Sobic001G277000 Sobic007G189800--Sobic010G146200 Sobic007G189800--Sobic008G124100 Sobic007G189800--Sobic009G064766 Sobic005G085600 Sobic005G085600 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic003G176100--Sobic010G146200 Sobic009G113600 Sobic009G113600 Sobic003G176100--Sobic009G113600 Sobic008G108900 Sobic008G108900 Sobic003G176100--Sobic008G108900 Sobic007G059300 Sobic007G059300 Sobic003G176100--Sobic007G059300 Sobic003G176100--Sobic002G051400 Sobic010G050600 Sobic010G050600 Sobic003G176100--Sobic010G050600 Sobic009G196700 Sobic009G196700 Sobic003G176100--Sobic009G196700 Sobic002G062300 Sobic002G062300 Sobic003G176100--Sobic002G062300 Sobic006G132200 Sobic006G132200 Sobic003G176100--Sobic006G132200 Sobic010G146200--Sobic003G176100 Sobic010G146200--Sobic009G113600 Sobic010G146200--Sobic010G050600 Sobic010G146200--Sobic005G130100 Sobic010G146200--Sobic007G059300 Sobic010G146200--Sobic002G051400 SobicK024000 SobicK024000 Sobic010G146200--SobicK024000 Sobic010G146200--Sobic009G078500 Sobic010G146200--Sobic007G189800 Sobic007G094600 Sobic007G094600 Sobic006G020600--Sobic007G094600 Sobic006G020500 Sobic006G020500 Sobic006G020600--Sobic006G020500 Sobic006G020600--Sobic002G051400 Sobic006G020600--Sobic008G124100 Sobic006G020600--Sobic010G146200 Sobic002G314600 Sobic002G314600 Sobic006G020600--Sobic002G314600 Sobic006G020600--Sobic009G078500 Sobic009G231300 Sobic009G231300 Sobic006G020600--Sobic009G231300 Sobic006G020600--Sobic003G176100 Sobic002G051400--Sobic009G113600 Sobic002G051400--Sobic007G059300 Sobic002G051400--Sobic008G108900 Sobic002G051400--Sobic002G062300 Sobic002G051400--Sobic003G176100 Sobic002G051400--Sobic009G196700 Sobic002G051400--Sobic010G146200 Sobic002G051400--SobicK024000 Sobic008G009500 Sobic008G009500 Sobic002G051400--Sobic008G009500 Sobic001G164200--Sobic008G013900 Sobic001G164200--Sobic001G182300 Sobic001G164200--Sobic008G049000 Sobic001G164200--Sobic002G094500 Sobic001G164200--Sobic007G129401 Sobic001G164200--Sobic003G219000 Sobic009G026400 Sobic009G026400 Sobic001G164200--Sobic009G026400 Sobic002G060500 Sobic002G060500 Sobic001G164200--Sobic002G060500 Sobic005G043400 Sobic005G043400 Sobic001G164200--Sobic005G043400
Octagon: transcription factors


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