Gene annotation
Transcriptome id Sobic.007G059300.1
Synonym
Functional annotation -
UniProt A0A1B6PFU9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G062300 expressed protein -
2 Sobic.009G113600 - -
3 Sobic.009G196700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.003G031750 - -
5 Sobic.K024000 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
6 Sobic.008G108900 GRF zinc finger family protein, expressed -
7 Sobic.009G026400 - -
8 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
9 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
10 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
11 Sobic.003G176100 expressed protein -
12 Sobic.002G221200 zinc knuckle domain containing protein, expressed -
13 Sobic.008G009500 pentatricopeptide, putative, expressed -
14 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.008G091900 - -
16 Sobic.001G240400 ENT domain containing protein, expressed -
17 Sobic.002G060500 OsFBX237 - F-box domain containing protein, expressed -
18 Sobic.008G036500 - -
19 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
20 Sobic.009G209800 OsFBX49 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G059300 Sobic007G059300 Sobic002G062300 Sobic002G062300 Sobic007G059300--Sobic002G062300 Sobic009G113600 Sobic009G113600 Sobic007G059300--Sobic009G113600 Sobic009G196700 Sobic009G196700 Sobic007G059300--Sobic009G196700 Sobic003G031750 Sobic003G031750 Sobic007G059300--Sobic003G031750 SobicK024000 SobicK024000 Sobic007G059300--SobicK024000 Sobic008G108900 Sobic008G108900 Sobic007G059300--Sobic008G108900 Sobic009G026400 Sobic009G026400 Sobic007G059300--Sobic009G026400 Sobic006G132200 Sobic006G132200 Sobic007G059300--Sobic006G132200 Sobic002G051400 Sobic002G051400 Sobic007G059300--Sobic002G051400 Sobic002G062300--Sobic009G113600 Sobic002G062300--Sobic007G059300 Sobic002G062300--SobicK024000 Sobic005G212600 Sobic005G212600 Sobic002G062300--Sobic005G212600 Sobic002G062300--Sobic003G031750 Sobic008G009500 Sobic008G009500 Sobic002G062300--Sobic008G009500 Sobic002G062300--Sobic008G108900 Sobic002G062300--Sobic009G196700 Sobic001G253100 Sobic001G253100 Sobic002G062300--Sobic001G253100 Sobic009G113600--Sobic002G062300 Sobic009G113600--Sobic007G059300 Sobic009G113600--SobicK024000 Sobic009G113600--Sobic009G196700 Sobic009G113600--Sobic008G009500 Sobic009G113600--Sobic008G108900 Sobic009G113600--Sobic003G031750 Sobic008G031350 Sobic008G031350 Sobic009G113600--Sobic008G031350 Sobic010G146200 Sobic010G146200 Sobic009G113600--Sobic010G146200 Sobic009G196700--Sobic009G113600 Sobic009G196700--Sobic008G108900 Sobic009G196700--Sobic007G059300 Sobic009G196700--Sobic006G132200 Sobic009G196700--Sobic002G062300 Sobic009G196700--Sobic003G031750 Sobic009G196700--SobicK024000 Sobic008G036500 Sobic008G036500 Sobic009G196700--Sobic008G036500 Sobic003G176100 Sobic003G176100 Sobic009G196700--Sobic003G176100 Sobic003G031750--Sobic002G062300 Sobic003G031750--Sobic007G059300 Sobic008G091900 Sobic008G091900 Sobic003G031750--Sobic008G091900 Sobic003G031750--Sobic009G113600 Sobic003G031750--SobicK024000 Sobic002G221200 Sobic002G221200 Sobic003G031750--Sobic002G221200 Sobic003G031750--Sobic009G196700 Sobic003G031750--Sobic001G253100 Sobic008G079100 Sobic008G079100 Sobic003G031750--Sobic008G079100 SobicK024000--Sobic008G009500 SobicK024000--Sobic009G113600 SobicK024000--Sobic002G062300 SobicK024000--Sobic007G059300 Sobic009G209800 Sobic009G209800 SobicK024000--Sobic009G209800 SobicK024000--Sobic003G031750 SobicK024000--Sobic001G253100 SobicK024000--Sobic008G079100 SobicK024000--Sobic002G221200 Sobic008G108900--Sobic006G132200 Sobic008G108900--Sobic009G196700 Sobic008G108900--Sobic002G062300 Sobic008G108900--Sobic009G113600 Sobic008G108900--Sobic007G059300 Sobic008G108900--Sobic005G212600 Sobic008G108900--Sobic003G176100 Sobic008G108900--Sobic002G051400 Sobic008G108900--Sobic003G031750 Sobic002G060500 Sobic002G060500 Sobic009G026400--Sobic002G060500 Sobic009G101600 Sobic009G101600 Sobic009G026400--Sobic009G101600 Sobic009G026400--Sobic007G059300 Sobic009G026400--Sobic002G062300 Sobic004G196500 Sobic004G196500 Sobic009G026400--Sobic004G196500 Sobic009G026400--Sobic009G113600 Sobic005G054600 Sobic005G054600 Sobic009G026400--Sobic005G054600 Sobic005G142200 Sobic005G142200 Sobic009G026400--Sobic005G142200 Sobic005G054300 Sobic005G054300 Sobic009G026400--Sobic005G054300 Sobic006G132200--Sobic008G108900 Sobic006G132200--Sobic009G196700 Sobic006G132200--Sobic002G062300 Sobic006G132200--Sobic009G113600 Sobic006G132200--Sobic005G212600 Sobic006G132200--Sobic007G059300 Sobic006G132200--Sobic003G031750 Sobic006G132200--Sobic008G091900 Sobic006G132200--Sobic008G031350 Sobic002G051400--Sobic009G113600 Sobic002G051400--Sobic007G059300 Sobic002G051400--Sobic008G108900 Sobic002G051400--Sobic002G062300 Sobic002G051400--Sobic003G176100 Sobic002G051400--Sobic009G196700 Sobic002G051400--Sobic010G146200 Sobic002G051400--SobicK024000 Sobic002G051400--Sobic008G009500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.