Gene annotation
Transcriptome id Sobic.005G085600.1
Synonym Sb05g006960
Functional annotation OsFBK25 - F-box domain and kelch repeat containing protein, expressed
UniProt C5Y7S5
Pfam PF00646 PF01344
Panther DB PTHR24414 PTHR24414:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G44130 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os11g14140.1 : OsFBK25 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a015592 , Zm00025a029559
Brachypodium KQJ88763 , KQJ88762
Barley HORVU4Hr1G015000.3 , HORVU4Hr1G015000.4 , HORVU4Hr1G015000.5 , HORVU4Hr1G015000.1 , HORVU4Hr1G015000.2 , HORVU4Hr1G014970.1
Wheat TraesCS4D02G085000
Populus -


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cDNA sequences
Sobic.005G085600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
4 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
5 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
6 Sobic.009G159700 expressed protein -
7 Sobic.004G199600 DUF581 domain containing protein, expressed -
8 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
10 Sobic.006G194150 - -
11 Sobic.009G109450 - -
12 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
13 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
14 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
17 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
18 Sobic.009G064766 - -
19 Sobic.005G121800 expressed protein -
20 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -


Gene co-expression network
sample Sobic005G085600 Sobic005G085600 Sobic005G085200 Sobic005G085200 Sobic005G085600--Sobic005G085200 Sobic007G189800 Sobic007G189800 Sobic005G085600--Sobic007G189800 Sobic001G032100 Sobic001G032100 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic001G363100 Sobic001G363100 Sobic005G085600--Sobic001G363100 Sobic009G159700 Sobic009G159700 Sobic005G085600--Sobic009G159700 Sobic004G199600 Sobic004G199600 Sobic005G085600--Sobic004G199600 Sobic009G078500 Sobic009G078500 Sobic005G085600--Sobic009G078500 Sobic010G057300 Sobic010G057300 Sobic005G085600--Sobic010G057300 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic004G345900 Sobic004G345900 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic005G085200--Sobic004G199600 Sobic010G057400 Sobic010G057400 Sobic005G085200--Sobic010G057400 Sobic005G085200--Sobic009G159700 Sobic005G085200--Sobic009G078500 Sobic004G285800 Sobic004G285800 Sobic005G085200--Sobic004G285800 Sobic001G277000 Sobic001G277000 Sobic007G189800--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic007G189800--Sobic010G146200 Sobic008G124100 Sobic008G124100 Sobic007G189800--Sobic008G124100 Sobic009G064766 Sobic009G064766 Sobic007G189800--Sobic009G064766 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic003G296600 Sobic003G296600 Sobic001G032100--Sobic003G296600 Sobic001G032100--Sobic005G085600 Sobic001G247400 Sobic001G247400 Sobic001G032100--Sobic001G247400 Sobic006G194150 Sobic006G194150 Sobic001G032100--Sobic006G194150 Sobic004G221900 Sobic004G221900 Sobic001G032100--Sobic004G221900 Sobic003G034500 Sobic003G034500 Sobic001G032100--Sobic003G034500 Sobic003G293900 Sobic003G293900 Sobic001G032100--Sobic003G293900 Sobic001G225100 Sobic001G225100 Sobic001G032100--Sobic001G225100 Sobic009G183500 Sobic009G183500 Sobic001G032100--Sobic009G183500 Sobic009G180200--Sobic004G199600 Sobic009G180200--Sobic001G363100 Sobic009G109450 Sobic009G109450 Sobic009G180200--Sobic009G109450 Sobic009G180200--Sobic009G078500 Sobic007G023700 Sobic007G023700 Sobic009G180200--Sobic007G023700 Sobic009G231300 Sobic009G231300 Sobic009G180200--Sobic009G231300 Sobic005G130100 Sobic005G130100 Sobic009G180200--Sobic005G130100 Sobic003G258400 Sobic003G258400 Sobic009G180200--Sobic003G258400 Sobic005G121800 Sobic005G121800 Sobic009G180200--Sobic005G121800 Sobic001G363100--Sobic009G180200 Sobic001G363100--Sobic005G003200 Sobic001G363100--Sobic006G249000 Sobic001G363100--Sobic009G078500 Sobic001G363100--Sobic004G199600 Sobic001G363100--Sobic005G130100 Sobic001G363100--Sobic010G146200 Sobic001G363100--Sobic005G085600 Sobic001G363100--Sobic004G221900 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G166801 Sobic009G166801 Sobic009G159700--Sobic009G166801 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic009G159700--Sobic004G345900 Sobic009G159700--Sobic010G057400 Sobic004G199600--Sobic009G078500 Sobic004G199600--Sobic009G109450 Sobic004G199600--Sobic009G180200 Sobic004G199600--Sobic005G130100 Sobic004G199600--Sobic009G231300 Sobic004G199600--Sobic010G146200 Sobic004G199600--Sobic001G363100 Sobic004G199600--Sobic005G121800 Sobic004G199600--Sobic007G189800 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic009G078500--Sobic010G146200 Sobic009G078500--Sobic001G363100 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic010G057300--Sobic004G199600 Sobic009G180100 Sobic009G180100 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800
Octagon: transcription factors


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