Gene annotation
Transcriptome id Sobic.004G285800.1
Synonym Sb04g032170
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transmembrane amino acid transporter protein, putative, expressed
UniProt C5Y1B3
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF259
NCBI CDD KOG1304; Amino acid transporters
KEGG Orthology K14209; SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42005 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os02g44980.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a021470 , Zm00025a056799
Brachypodium KQJ84070 , KQK00685
Barley HORVU6Hr1G064740.1 , HORVU6Hr1G064740.2
Wheat -
Populus -


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cDNA sequences
Sobic.004G285800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
2 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
3 Sobic.009G159700 expressed protein -
4 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.009G180100 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
8 Sobic.001G379600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
9 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
10 Sobic.009G166801 - -
11 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
12 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
13 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
14 Sobic.004G199600 DUF581 domain containing protein, expressed -
15 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
16 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.010G110700 Acyl activating enzyme 5 AAE5 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed -
18 Sobic.005G182200 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
19 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
20 Sobic.003G221200 CTP synthase, putative, expressed K01937: pyrG, CTP synthase


Gene co-expression network
sample Sobic004G285800 Sobic004G285800 Sobic010G057300 Sobic010G057300 Sobic004G285800--Sobic010G057300 Sobic005G085200 Sobic005G085200 Sobic004G285800--Sobic005G085200 Sobic009G159700 Sobic009G159700 Sobic004G285800--Sobic009G159700 Sobic005G085600 Sobic005G085600 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic009G180100 Sobic009G180100 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic010G057400 Sobic010G057400 Sobic004G285800--Sobic010G057400 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic004G345900 Sobic004G345900 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic004G199600 Sobic004G199600 Sobic010G057300--Sobic004G199600 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic007G189800 Sobic007G189800 Sobic010G057300--Sobic007G189800 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic005G085200--Sobic004G345900 Sobic005G085200--Sobic007G189800 Sobic005G085200--Sobic004G199600 Sobic005G085200--Sobic010G057400 Sobic005G085200--Sobic009G159700 Sobic009G078500 Sobic009G078500 Sobic005G085200--Sobic009G078500 Sobic005G085200--Sobic004G285800 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G166801 Sobic009G166801 Sobic009G159700--Sobic009G166801 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic009G159700--Sobic004G345900 Sobic009G159700--Sobic010G057400 Sobic005G085600--Sobic005G085200 Sobic005G085600--Sobic007G189800 Sobic001G032100 Sobic001G032100 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic005G085600--Sobic004G199600 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300 Sobic001G191200 Sobic001G191200 Sobic001G078200--Sobic001G191200 Sobic001G078200--Sobic005G085200 Sobic001G078200--Sobic010G057300 Sobic001G078200--Sobic004G285800 Sobic001G078200--Sobic005G085600 Sobic001G423100 Sobic001G423100 Sobic001G078200--Sobic001G423100 Sobic003G406700 Sobic003G406700 Sobic001G078200--Sobic003G406700 Sobic001G078200--Sobic009G159700 Sobic009G213400 Sobic009G213400 Sobic001G078200--Sobic009G213400 Sobic009G180100--Sobic010G057300 Sobic009G180100--Sobic001G379600 Sobic009G180100--Sobic010G057400 Sobic009G180100--Sobic004G345900 Sobic009G180100--Sobic004G285800 Sobic009G180100--Sobic010G270300 Sobic009G180100--Sobic005G085200 Sobic009G180100--Sobic004G199600 Sobic005G130100 Sobic005G130100 Sobic009G180100--Sobic005G130100 Sobic001G363100--Sobic009G180200 Sobic005G003200 Sobic005G003200 Sobic001G363100--Sobic005G003200 Sobic006G249000 Sobic006G249000 Sobic001G363100--Sobic006G249000 Sobic001G363100--Sobic009G078500 Sobic001G363100--Sobic004G199600 Sobic001G363100--Sobic005G130100 Sobic010G146200 Sobic010G146200 Sobic001G363100--Sobic010G146200 Sobic001G363100--Sobic005G085600 Sobic004G221900 Sobic004G221900 Sobic001G363100--Sobic004G221900 Sobic001G379600--Sobic009G180100 Sobic001G379600--Sobic004G285800 Sobic001G379600--Sobic010G057300 Sobic002G188500 Sobic002G188500 Sobic001G379600--Sobic002G188500 Sobic001G379600--Sobic010G057400 Sobic004G315100 Sobic004G315100 Sobic001G379600--Sobic004G315100 Sobic010G110700 Sobic010G110700 Sobic001G379600--Sobic010G110700 Sobic001G379600--Sobic004G345900 Sobic001G379600--Sobic009G159700 Sobic010G057400--Sobic004G345900 Sobic010G057400--Sobic010G057300 Sobic010G057400--Sobic005G085200 Sobic010G057400--Sobic004G199600 Sobic010G057400--Sobic010G270300 Sobic010G057400--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic010G057400--Sobic001G277000 Sobic010G057400--Sobic010G146200 Sobic010G057400--Sobic009G078500
Octagon: transcription factors


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