Gene annotation
Transcriptome id Sobic.001G379600.1
Synonym Sb01g036020, CIPK10, PKS2, SNRK3.8, SbCIPK19, SIP1,CBL-interacting protein kinases
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7R9
Pfam PF14531 PF03822
Panther DB PTHR24347 PTHR24347:SF167
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G58380 : SOS3-interacting protein 1
RAP-DB (Rice) LOC_Os03g22050.3 : CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a002369
Brachypodium -
Barley -
Wheat TraesCS4A02G136500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G180100 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
2 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
3 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
4 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
5 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
6 Sobic.004G315100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
7 Sobic.010G110700 Acyl activating enzyme 5 AAE5 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed -
8 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
9 Sobic.009G159700 expressed protein -
10 Sobic.005G182200 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
11 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.007G217700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY30, expressed K18835: WRKY transcription factor 2
13 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G037900 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
15 Sobic.009G166801 - -
16 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
17 Sobic.010G270300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@rhodanese-like domain containing protein, putative, expressed -
18 Sobic.003G148700 powdery mildew resistant protein 5, putative, expressed -
19 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
20 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -


Gene co-expression network
sample Sobic001G379600 Sobic001G379600 Sobic009G180100 Sobic009G180100 Sobic001G379600--Sobic009G180100 Sobic004G285800 Sobic004G285800 Sobic001G379600--Sobic004G285800 Sobic010G057300 Sobic010G057300 Sobic001G379600--Sobic010G057300 Sobic002G188500 Sobic002G188500 Sobic001G379600--Sobic002G188500 Sobic010G057400 Sobic010G057400 Sobic001G379600--Sobic010G057400 Sobic004G315100 Sobic004G315100 Sobic001G379600--Sobic004G315100 Sobic010G110700 Sobic010G110700 Sobic001G379600--Sobic010G110700 Sobic004G345900 Sobic004G345900 Sobic001G379600--Sobic004G345900 Sobic009G159700 Sobic009G159700 Sobic001G379600--Sobic009G159700 Sobic009G180100--Sobic010G057300 Sobic009G180100--Sobic001G379600 Sobic009G180100--Sobic010G057400 Sobic009G180100--Sobic004G345900 Sobic009G180100--Sobic004G285800 Sobic010G270300 Sobic010G270300 Sobic009G180100--Sobic010G270300 Sobic005G085200 Sobic005G085200 Sobic009G180100--Sobic005G085200 Sobic004G199600 Sobic004G199600 Sobic009G180100--Sobic004G199600 Sobic005G130100 Sobic005G130100 Sobic009G180100--Sobic005G130100 Sobic004G285800--Sobic010G057300 Sobic004G285800--Sobic005G085200 Sobic004G285800--Sobic009G159700 Sobic005G085600 Sobic005G085600 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic004G285800--Sobic001G379600 Sobic004G285800--Sobic010G057400 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic010G057300--Sobic004G199600 Sobic010G057300--Sobic009G180100 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic007G189800 Sobic007G189800 Sobic010G057300--Sobic007G189800 Sobic009G235900 Sobic009G235900 Sobic002G188500--Sobic009G235900 Sobic003G005800 Sobic003G005800 Sobic002G188500--Sobic003G005800 Sobic004G037900 Sobic004G037900 Sobic002G188500--Sobic004G037900 Sobic001G498200 Sobic001G498200 Sobic002G188500--Sobic001G498200 Sobic001G194900 Sobic001G194900 Sobic002G188500--Sobic001G194900 Sobic006G138400 Sobic006G138400 Sobic002G188500--Sobic006G138400 Sobic003G145900 Sobic003G145900 Sobic002G188500--Sobic003G145900 Sobic008G160700 Sobic008G160700 Sobic002G188500--Sobic008G160700 Sobic001G490000 Sobic001G490000 Sobic002G188500--Sobic001G490000 Sobic010G057400--Sobic004G345900 Sobic010G057400--Sobic010G057300 Sobic010G057400--Sobic005G085200 Sobic010G057400--Sobic004G199600 Sobic010G057400--Sobic010G270300 Sobic010G057400--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic010G057400--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic010G057400--Sobic010G146200 Sobic009G078500 Sobic009G078500 Sobic010G057400--Sobic009G078500 Sobic004G315100--Sobic004G345900 Sobic010G143400 Sobic010G143400 Sobic004G315100--Sobic010G143400 Sobic004G315100--Sobic010G057400 Sobic009G197000 Sobic009G197000 Sobic004G315100--Sobic009G197000 Sobic004G315100--Sobic001G277000 Sobic004G216700 Sobic004G216700 Sobic004G315100--Sobic004G216700 Sobic004G315100--Sobic009G159700 Sobic007G131200 Sobic007G131200 Sobic004G315100--Sobic007G131200 Sobic004G315100--Sobic005G085200 Sobic009G030100 Sobic009G030100 Sobic010G110700--Sobic009G030100 Sobic009G166801 Sobic009G166801 Sobic010G110700--Sobic009G166801 Sobic010G110700--Sobic004G285800 Sobic010G110700--Sobic010G057300 Sobic010G110700--Sobic009G159700 Sobic003G293900 Sobic003G293900 Sobic010G110700--Sobic003G293900 Sobic010G110700--Sobic001G379600 Sobic002G338300 Sobic002G338300 Sobic010G110700--Sobic002G338300 Sobic010G110700--Sobic009G180100 Sobic004G345900--Sobic010G057400 Sobic004G345900--Sobic005G085200 Sobic004G345900--Sobic010G057300 Sobic004G345900--Sobic001G277000 Sobic004G345900--Sobic007G189800 Sobic004G345900--Sobic004G199600 Sobic002G213800 Sobic002G213800 Sobic004G345900--Sobic002G213800 Sobic004G345900--Sobic010G270300 Sobic004G345900--Sobic010G146200 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G159700--Sobic009G166801 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic009G159700--Sobic004G345900 Sobic009G159700--Sobic010G057400
Octagon: transcription factors


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