Gene annotation
Transcriptome id Sobic.007G217700.2,Sobic.007G217700.4,Sobic.007G217700.1,Sobic.007G217700.3,Sobic.007G217700.5,Sobic.007G217700.6,Sobic.007G217700.7
Synonym ATWRKY2, Sb07g028430, WRKY2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
WRKY30, expressed
UniProt A0A1Z5RB33 , A0A1Z5RBX4 , A0A1B6PJ52 , A0A1Z5RB32 , A0A1B6PJ13
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF35
NCBI CDD -
KEGG Orthology K18835; WRKY transcription factor 2
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G56270 : WRKY DNA-binding protein 2,WRKY DNA-binding protein 33
RAP-DB (Rice) LOC_Os08g38990.2,LOC_Os08g38990.1,LOC_Os08g38990.4 : WRKY30, expressed
MaizeGDB (Corn) Zm00025a033750
Brachypodium PNT61277 , KQJ83108
Barley -
Wheat TraesCS7A02G240800 , TraesCS1B02G453300 , TraesCS1B02G453300 , TraesCS1B02G453300 , TraesCS1A02G421800 , TraesCS1A02G421900
Populus PNT58610 , PNT58611 , PNT58609


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
2 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
3 Sobic.005G014950 - -
4 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
5 Sobic.001G087100 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome C, putative, expressed -
6 Sobic.007G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
7 Sobic.009G015800 expressed protein -
8 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
9 Sobic.009G159700 expressed protein -
10 Sobic.001G379600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
11 Sobic.002G376300 FYVE zinc finger family protein, expressed -
12 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
14 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
16 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
17 Sobic.007G120401 - -
18 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
19 Sobic.001G043400 expressed protein -
20 Sobic.008G060900 - -


Gene co-expression network
sample Sobic007G217700 Sobic007G217700 Sobic004G285800 Sobic004G285800 Sobic007G217700--Sobic004G285800 Sobic010G057300 Sobic010G057300 Sobic007G217700--Sobic010G057300 Sobic005G014950 Sobic005G014950 Sobic007G217700--Sobic005G014950 Sobic002G188500 Sobic002G188500 Sobic007G217700--Sobic002G188500 Sobic001G087100 Sobic001G087100 Sobic007G217700--Sobic001G087100 Sobic007G202800 Sobic007G202800 Sobic007G217700--Sobic007G202800 Sobic009G015800 Sobic009G015800 Sobic007G217700--Sobic009G015800 Sobic006G215900 Sobic006G215900 Sobic007G217700--Sobic006G215900 Sobic009G159700 Sobic009G159700 Sobic007G217700--Sobic009G159700 Sobic004G285800--Sobic010G057300 Sobic005G085200 Sobic005G085200 Sobic004G285800--Sobic005G085200 Sobic004G285800--Sobic009G159700 Sobic005G085600 Sobic005G085600 Sobic004G285800--Sobic005G085600 Sobic001G078200 Sobic001G078200 Sobic004G285800--Sobic001G078200 Sobic009G180100 Sobic009G180100 Sobic004G285800--Sobic009G180100 Sobic001G363100 Sobic001G363100 Sobic004G285800--Sobic001G363100 Sobic001G379600 Sobic001G379600 Sobic004G285800--Sobic001G379600 Sobic010G057400 Sobic010G057400 Sobic004G285800--Sobic010G057400 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic004G345900 Sobic004G345900 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic004G199600 Sobic004G199600 Sobic010G057300--Sobic004G199600 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic007G189800 Sobic007G189800 Sobic010G057300--Sobic007G189800 Sobic001G043900 Sobic001G043900 Sobic005G014950--Sobic001G043900 Sobic001G221100 Sobic001G221100 Sobic005G014950--Sobic001G221100 Sobic001G428400 Sobic001G428400 Sobic005G014950--Sobic001G428400 Sobic010G042900 Sobic010G042900 Sobic005G014950--Sobic010G042900 Sobic003G079750 Sobic003G079750 Sobic005G014950--Sobic003G079750 Sobic008G126200 Sobic008G126200 Sobic005G014950--Sobic008G126200 Sobic001G039700 Sobic001G039700 Sobic005G014950--Sobic001G039700 Sobic004G034400 Sobic004G034400 Sobic005G014950--Sobic004G034400 Sobic007G115900 Sobic007G115900 Sobic005G014950--Sobic007G115900 Sobic009G235900 Sobic009G235900 Sobic002G188500--Sobic009G235900 Sobic003G005800 Sobic003G005800 Sobic002G188500--Sobic003G005800 Sobic004G037900 Sobic004G037900 Sobic002G188500--Sobic004G037900 Sobic001G498200 Sobic001G498200 Sobic002G188500--Sobic001G498200 Sobic001G194900 Sobic001G194900 Sobic002G188500--Sobic001G194900 Sobic006G138400 Sobic006G138400 Sobic002G188500--Sobic006G138400 Sobic003G145900 Sobic003G145900 Sobic002G188500--Sobic003G145900 Sobic008G160700 Sobic008G160700 Sobic002G188500--Sobic008G160700 Sobic001G490000 Sobic001G490000 Sobic002G188500--Sobic001G490000 Sobic001G043400 Sobic001G043400 Sobic001G087100--Sobic001G043400 Sobic004G232000 Sobic004G232000 Sobic001G087100--Sobic004G232000 Sobic005G015100 Sobic005G015100 Sobic001G087100--Sobic005G015100 Sobic003G174800 Sobic003G174800 Sobic001G087100--Sobic003G174800 Sobic001G087100--Sobic009G015800 Sobic002G076000 Sobic002G076000 Sobic001G087100--Sobic002G076000 Sobic007G043900 Sobic007G043900 Sobic001G087100--Sobic007G043900 Sobic009G225200 Sobic009G225200 Sobic001G087100--Sobic009G225200 Sobic010G166000 Sobic010G166000 Sobic001G087100--Sobic010G166000 Sobic007G120401 Sobic007G120401 Sobic007G202800--Sobic007G120401 Sobic005G209000 Sobic005G209000 Sobic007G202800--Sobic005G209000 Sobic007G189500 Sobic007G189500 Sobic007G202800--Sobic007G189500 Sobic007G202800--Sobic001G087100 Sobic001G240300 Sobic001G240300 Sobic007G202800--Sobic001G240300 Sobic009G154600 Sobic009G154600 Sobic007G202800--Sobic009G154600 Sobic007G202800--Sobic010G057300 Sobic006G228700 Sobic006G228700 Sobic007G202800--Sobic006G228700 Sobic010G083900 Sobic010G083900 Sobic007G202800--Sobic010G083900 Sobic009G015800--Sobic005G015100 Sobic009G015800--Sobic009G225200 Sobic002G259800 Sobic002G259800 Sobic009G015800--Sobic002G259800 Sobic002G158700 Sobic002G158700 Sobic009G015800--Sobic002G158700 Sobic002G421700 Sobic002G421700 Sobic009G015800--Sobic002G421700 Sobic009G015800--Sobic001G087100 Sobic009G015800--Sobic004G232000 Sobic005G015900 Sobic005G015900 Sobic009G015800--Sobic005G015900 Sobic001G315100 Sobic001G315100 Sobic009G015800--Sobic001G315100 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic009G159700--Sobic005G085200 Sobic009G159700--Sobic005G085600 Sobic009G159700--Sobic004G285800 Sobic009G166801 Sobic009G166801 Sobic009G159700--Sobic009G166801 Sobic009G159700--Sobic010G057300 Sobic009G159700--Sobic007G189800 Sobic006G241200 Sobic006G241200 Sobic009G159700--Sobic006G241200 Sobic009G159700--Sobic004G345900 Sobic009G159700--Sobic010G057400
Octagon: transcription factors


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