Gene annotation
Transcriptome id Sobic.006G215900.1
Synonym Sb06g028600
Functional annotation OsFBX172 - F-box domain containing protein, expressed
UniProt C5YG22
Pfam -
Panther DB PTHR32212 PTHR32212:SF102
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62230 : F-box family protein
RAP-DB (Rice) LOC_Os05g46300.1 : OsFBX172 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
2 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
3 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
4 Sobic.001G106100 expressed protein -
5 Sobic.004G111700 tyrosine-protein phosphatase YVH1, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
6 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
7 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
8 Sobic.001G376100 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@OsFBX72 - F-box domain containing protein, expressed -
9 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
10 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
11 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
12 Sobic.005G013200 BAH domain containing protein, expressed -
13 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
14 Sobic.009G028901 - -
15 Sobic.002G260400 - -
16 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
17 Sobic.002G053000 expressed protein -
18 Sobic.008G152900 MATH domain containing protein, expressed -
19 Sobic.010G245000 DTW domain containing protein, putative, expressed -
20 Sobic.002G299100 SET domain containing protein, expressed -


Gene co-expression network
sample Sobic006G215900 Sobic006G215900 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic004G219100--Sobic005G015900 Sobic001G407200 Sobic001G407200 Sobic004G219100--Sobic001G407200 Sobic005G013200 Sobic005G013200 Sobic004G219100--Sobic005G013200 Sobic002G320500 Sobic002G320500 Sobic004G219100--Sobic002G320500 Sobic004G219100--Sobic002G158700 Sobic010G129200 Sobic010G129200 Sobic004G219100--Sobic010G129200 Sobic006G032400 Sobic006G032400 Sobic004G219100--Sobic006G032400 Sobic004G219100--Sobic008G149800 Sobic001G303675 Sobic001G303675 Sobic004G219100--Sobic001G303675 Sobic001G114000 Sobic001G114000 Sobic004G067700--Sobic001G114000 Sobic006G173100 Sobic006G173100 Sobic004G067700--Sobic006G173100 Sobic002G370900 Sobic002G370900 Sobic004G067700--Sobic002G370900 Sobic001G512700 Sobic001G512700 Sobic004G067700--Sobic001G512700 Sobic007G217000 Sobic007G217000 Sobic004G067700--Sobic007G217000 Sobic009G126400 Sobic009G126400 Sobic004G067700--Sobic009G126400 Sobic005G045300 Sobic005G045300 Sobic004G067700--Sobic005G045300 Sobic003G008500 Sobic003G008500 Sobic004G067700--Sobic003G008500 Sobic002G310200 Sobic002G310200 Sobic004G067700--Sobic002G310200 Sobic003G401000 Sobic003G401000 Sobic002G158700--Sobic003G401000 Sobic001G464200 Sobic001G464200 Sobic002G158700--Sobic001G464200 Sobic001G167200 Sobic001G167200 Sobic002G158700--Sobic001G167200 Sobic004G031700 Sobic004G031700 Sobic002G158700--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic002G158700--Sobic003G445400 Sobic007G000800 Sobic007G000800 Sobic002G158700--Sobic007G000800 Sobic007G061700 Sobic007G061700 Sobic002G158700--Sobic007G061700 Sobic002G158700--Sobic008G149800 Sobic002G396000 Sobic002G396000 Sobic002G158700--Sobic002G396000 Sobic001G106100--Sobic006G215900 Sobic008G173400 Sobic008G173400 Sobic001G106100--Sobic008G173400 Sobic001G042200 Sobic001G042200 Sobic001G106100--Sobic001G042200 Sobic008G058800 Sobic008G058800 Sobic001G106100--Sobic008G058800 Sobic004G246100 Sobic004G246100 Sobic001G106100--Sobic004G246100 Sobic002G197100 Sobic002G197100 Sobic001G106100--Sobic002G197100 Sobic003G074400 Sobic003G074400 Sobic001G106100--Sobic003G074400 Sobic007G056500 Sobic007G056500 Sobic001G106100--Sobic007G056500 Sobic007G189000 Sobic007G189000 Sobic001G106100--Sobic007G189000 Sobic006G186400 Sobic006G186400 Sobic004G111700--Sobic006G186400 Sobic002G260400 Sobic002G260400 Sobic004G111700--Sobic002G260400 Sobic004G111700--Sobic003G039900 Sobic004G111700--Sobic002G103600 Sobic001G066300 Sobic001G066300 Sobic004G111700--Sobic001G066300 Sobic007G103600 Sobic007G103600 Sobic004G111700--Sobic007G103600 Sobic004G111700--Sobic006G215900 Sobic007G090430 Sobic007G090430 Sobic004G111700--Sobic007G090430 Sobic010G166400 Sobic010G166400 Sobic004G111700--Sobic010G166400 Sobic003G444800 Sobic003G444800 Sobic002G103600--Sobic003G444800 Sobic002G103600--Sobic005G013200 SobicK028600 SobicK028600 Sobic002G103600--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G408200 Sobic002G408200 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic007G042400 Sobic007G042400 Sobic002G103600--Sobic007G042400 Sobic001G141400 Sobic001G141400 Sobic003G039900--Sobic001G141400 Sobic007G147400 Sobic007G147400 Sobic003G039900--Sobic007G147400 Sobic006G234700 Sobic006G234700 Sobic003G039900--Sobic006G234700 Sobic003G039900--Sobic003G444800 Sobic003G039900--Sobic004G111700 Sobic003G039900--Sobic002G103600 Sobic009G228000 Sobic009G228000 Sobic003G039900--Sobic009G228000 Sobic003G039900--Sobic001G376100 Sobic001G376200 Sobic001G376200 Sobic003G039900--Sobic001G376200 Sobic001G376100--Sobic003G444800 Sobic001G376100--Sobic002G103600 Sobic002G112700 Sobic002G112700 Sobic001G376100--Sobic002G112700 Sobic001G376100--Sobic006G234700 Sobic007G008900 Sobic007G008900 Sobic001G376100--Sobic007G008900 Sobic001G376100--Sobic009G247400 Sobic001G376100--Sobic001G114000 Sobic010G247800 Sobic010G247800 Sobic001G376100--Sobic010G247800 Sobic001G376100--Sobic002G408200 Sobic006G116100 Sobic006G116100 Sobic008G149800--Sobic006G116100 Sobic008G153000 Sobic008G153000 Sobic008G149800--Sobic008G153000 Sobic008G149800--Sobic007G061700 Sobic002G357700 Sobic002G357700 Sobic008G149800--Sobic002G357700 Sobic002G164300 Sobic002G164300 Sobic008G149800--Sobic002G164300 Sobic008G149800--Sobic004G246100 Sobic008G149800--Sobic002G158700 Sobic005G154500 Sobic005G154500 Sobic008G149800--Sobic005G154500 Sobic001G155000 Sobic001G155000 Sobic008G149800--Sobic001G155000
Octagon: transcription factors


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