Gene annotation
Transcriptome id Sobic.009G028901.1
Synonym -
Functional annotation -
UniProt A0A1Z5R1P0
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF129
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G17480 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os04g08460.1 : OsFBX115 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87829
Barley HORVU5Hr1G115630.25 , HORVU5Hr1G115630.26 , HORVU5Hr1G115630.20 , HORVU5Hr1G115630.21 , HORVU5Hr1G115520.19 , HORVU5Hr1G115520.18 , HORVU5Hr1G115520.13 , HORVU5Hr1G115520.15 , HORVU5Hr1G115520.14 , HORVU5Hr1G115520.8 , HORVU5Hr1G115520.5 , HORVU5Hr1G115520.4 , HORVU5Hr1G115520.1 , HORVU5Hr1G115520.3 , HORVU5Hr1G115520.2 , HORVU5Hr1G116520.1 , HORVU5Hr1G115630.5 , HORVU5Hr1G115630.6 , HORVU5Hr1G115630.2 , HORVU5Hr1G115630.9 , HORVU5Hr1G116500.2 , HORVU5Hr1G116500.1 , HORVU5Hr1G115630.11 , HORVU5Hr1G115630.10 , HORVU5Hr1G115630.15 , HORVU5Hr1G115630.17 , HORVU5Hr1G115630.19 , HORVU5Hr1G115630.18 , HORVU5Hr1G119360.1 , HORVU7Hr1G120670.1 , HORVU5Hr1G115520.20 , HORVU5Hr1G115520.21
Wheat TraesCS5A02G451100 , TraesCS4A02G348200 , TraesCS5D02G062300 , TraesCS5D02G506700 , TraesCS5D02G506700 , TraesCS4A02G366700 , TraesCS4A02G366700 , TraesCS5A02G451000 , TraesCS5B02G506300 , TraesCS5B02G506300 , TraesCS4A02G366600 , TraesCS5B02G524800 , TraesCS5D02G521000 , TraesCS5D02G461300 , TraesCS7B02G077900 , TraesCS5D02G461200 , TraesCS5B02G506900 , TraesCS5B02G459500 , TraesCS5D02G461400 , TraesCS5B02G505800 , TraesCS5B02G505800 , TraesCS5B02G505800 , TraesCS5B02G505800 , TraesCS5B02G505500 , TraesCS5B02G505500 , TraesCS5D02G461000 , TraesCS5B02G506800 , TraesCS5B02G522100 , TraesCS5B02G506800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
2 Sobic.003G439501 - -
3 Sobic.009G251200 expressed protein -
4 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
5 Sobic.008G098600 DNA-directed RNA polymerase III subunit RPC9, putative, expressed -
6 Sobic.004G039700 OsFBX188 - F-box domain containing protein, expressed -
7 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
8 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
9 Sobic.007G216700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
10 Sobic.006G078600 expressed protein K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
11 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
12 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
13 Sobic.010G166400 initiator tRNA phosphoribosyl transferase family protein, putative, expressed K15463: tRNA A64-2'-O-ribosylphosphate transferase
14 Sobic.005G106101 - -
15 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
16 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.002G262700 RNA recognition motif containing protein, putative, expressed K13155: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
18 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
19 Sobic.010G151900 ribonuclease P family protein, putative, expressed K03538: POP4, ribonuclease P protein subunit POP4
20 Sobic.002G310200 expressed protein -


Gene co-expression network
sample Sobic009G028901 Sobic009G028901 Sobic006G215900 Sobic006G215900 Sobic009G028901--Sobic006G215900 Sobic003G439501 Sobic003G439501 Sobic009G028901--Sobic003G439501 Sobic009G251200 Sobic009G251200 Sobic009G028901--Sobic009G251200 Sobic003G133900 Sobic003G133900 Sobic009G028901--Sobic003G133900 Sobic008G098600 Sobic008G098600 Sobic009G028901--Sobic008G098600 Sobic004G039700 Sobic004G039700 Sobic009G028901--Sobic004G039700 Sobic009G137100 Sobic009G137100 Sobic009G028901--Sobic009G137100 Sobic005G015100 Sobic005G015100 Sobic009G028901--Sobic005G015100 Sobic007G216700 Sobic007G216700 Sobic009G028901--Sobic007G216700 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic003G439501--Sobic009G028901 Sobic001G186850 Sobic001G186850 Sobic003G439501--Sobic001G186850 Sobic003G088700 Sobic003G088700 Sobic003G439501--Sobic003G088700 Sobic001G111900 Sobic001G111900 Sobic003G439501--Sobic001G111900 Sobic003G439501--Sobic004G039700 Sobic007G189500 Sobic007G189500 Sobic003G439501--Sobic007G189500 Sobic004G003501 Sobic004G003501 Sobic003G439501--Sobic004G003501 Sobic006G051700 Sobic006G051700 Sobic003G439501--Sobic006G051700 Sobic010G056000 Sobic010G056000 Sobic003G439501--Sobic010G056000 Sobic002G298100 Sobic002G298100 Sobic009G251200--Sobic002G298100 Sobic009G251200--Sobic003G133900 Sobic005G160100 Sobic005G160100 Sobic009G251200--Sobic005G160100 Sobic001G081000 Sobic001G081000 Sobic009G251200--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic009G251200--Sobic006G226300 Sobic004G309900 Sobic004G309900 Sobic009G251200--Sobic004G309900 Sobic006G185200 Sobic006G185200 Sobic009G251200--Sobic006G185200 Sobic001G393900 Sobic001G393900 Sobic009G251200--Sobic001G393900 Sobic008G014500 Sobic008G014500 Sobic009G251200--Sobic008G014500 Sobic003G133900--Sobic004G309900 Sobic001G493200 Sobic001G493200 Sobic003G133900--Sobic001G493200 Sobic002G083500 Sobic002G083500 Sobic003G133900--Sobic002G083500 Sobic001G398800 Sobic001G398800 Sobic003G133900--Sobic001G398800 Sobic007G183900 Sobic007G183900 Sobic003G133900--Sobic007G183900 Sobic005G172500 Sobic005G172500 Sobic003G133900--Sobic005G172500 Sobic006G210000 Sobic006G210000 Sobic003G133900--Sobic006G210000 Sobic004G200200 Sobic004G200200 Sobic003G133900--Sobic004G200200 Sobic007G071200 Sobic007G071200 Sobic003G133900--Sobic007G071200 Sobic010G007100 Sobic010G007100 Sobic008G098600--Sobic010G007100 Sobic003G214300 Sobic003G214300 Sobic008G098600--Sobic003G214300 Sobic003G382500 Sobic003G382500 Sobic008G098600--Sobic003G382500 Sobic009G046700 Sobic009G046700 Sobic008G098600--Sobic009G046700 Sobic003G006400 Sobic003G006400 Sobic008G098600--Sobic003G006400 Sobic006G142400 Sobic006G142400 Sobic008G098600--Sobic006G142400 Sobic008G098600--Sobic009G251200 Sobic010G264000 Sobic010G264000 Sobic008G098600--Sobic010G264000 Sobic001G322600 Sobic001G322600 Sobic008G098600--Sobic001G322600 Sobic007G096000 Sobic007G096000 Sobic004G039700--Sobic007G096000 Sobic004G208900 Sobic004G208900 Sobic004G039700--Sobic004G208900 Sobic003G280800 Sobic003G280800 Sobic004G039700--Sobic003G280800 Sobic008G162900 Sobic008G162900 Sobic004G039700--Sobic008G162900 Sobic010G277500 Sobic010G277500 Sobic004G039700--Sobic010G277500 Sobic003G176500 Sobic003G176500 Sobic004G039700--Sobic003G176500 Sobic007G161300 Sobic007G161300 Sobic004G039700--Sobic007G161300 Sobic003G052200 Sobic003G052200 Sobic004G039700--Sobic003G052200 Sobic007G096600 Sobic007G096600 Sobic004G039700--Sobic007G096600 Sobic004G246100 Sobic004G246100 Sobic009G137100--Sobic004G246100 Sobic002G370900 Sobic002G370900 Sobic009G137100--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic009G137100--Sobic002G197100 Sobic006G281700 Sobic006G281700 Sobic009G137100--Sobic006G281700 Sobic008G127400 Sobic008G127400 Sobic009G137100--Sobic008G127400 Sobic002G299100 Sobic002G299100 Sobic009G137100--Sobic002G299100 Sobic008G058800 Sobic008G058800 Sobic009G137100--Sobic008G058800 Sobic001G215400 Sobic001G215400 Sobic009G137100--Sobic001G215400 Sobic006G173100 Sobic006G173100 Sobic009G137100--Sobic006G173100 Sobic002G051450 Sobic002G051450 Sobic005G015100--Sobic002G051450 Sobic008G034600 Sobic008G034600 Sobic005G015100--Sobic008G034600 Sobic005G015100--Sobic002G158700 Sobic001G464200 Sobic001G464200 Sobic005G015100--Sobic001G464200 Sobic006G128900 Sobic006G128900 Sobic005G015100--Sobic006G128900 Sobic006G145000 Sobic006G145000 Sobic005G015100--Sobic006G145000 Sobic002G421700 Sobic002G421700 Sobic005G015100--Sobic002G421700 Sobic004G271900 Sobic004G271900 Sobic005G015100--Sobic004G271900 Sobic004G256600 Sobic004G256600 Sobic005G015100--Sobic004G256600 Sobic001G043400 Sobic001G043400 Sobic007G216700--Sobic001G043400 Sobic001G261496 Sobic001G261496 Sobic007G216700--Sobic001G261496 Sobic002G009401 Sobic002G009401 Sobic007G216700--Sobic002G009401 Sobic002G227200 Sobic002G227200 Sobic007G216700--Sobic002G227200 Sobic005G025300 Sobic005G025300 Sobic007G216700--Sobic005G025300 Sobic001G284800 Sobic001G284800 Sobic007G216700--Sobic001G284800 Sobic008G125600 Sobic008G125600 Sobic007G216700--Sobic008G125600 Sobic007G216700--Sobic003G088700 Sobic008G000900 Sobic008G000900 Sobic007G216700--Sobic008G000900
Octagon: transcription factors


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