Gene annotation
Transcriptome id Sobic.005G015100.1
Synonym
Functional annotation OsFBX291 - F-box domain containing protein, expressed
UniProt A0A1Z5RG78
Pfam PF00646 PF03478
Panther DB PTHR33110 PTHR33110:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G57790 : F-box family protein
RAP-DB (Rice) LOC_Os01g34630.1 : retrotransposon protein, putative, Ty1-copia subclass, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G015100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G051450 - -
2 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
3 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
4 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
5 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
6 Sobic.006G145000 disease resistance RPP13-like protein 1, putative, expressed -
7 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
8 Sobic.004G271900 RMD5 homolog A, putative, expressed -
9 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
10 Sobic.005G015900 dnaJ domain containing protein, expressed -
11 Sobic.009G225200 expressed protein -
12 Sobic.004G031700 expressed protein -
13 Sobic.001G315100 TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
14 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
15 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
16 Sobic.010G166000 ESP1, putative, expressed -
17 Sobic.009G015800 expressed protein -
18 Sobic.002G144966 - K02997: RP-S9e, small subunit ribosomal protein S9e
19 Sobic.009G045700 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
20 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -


Gene co-expression network
sample Sobic005G015100 Sobic005G015100 Sobic002G051450 Sobic002G051450 Sobic005G015100--Sobic002G051450 Sobic008G034600 Sobic008G034600 Sobic005G015100--Sobic008G034600 Sobic002G158700 Sobic002G158700 Sobic005G015100--Sobic002G158700 Sobic001G464200 Sobic001G464200 Sobic005G015100--Sobic001G464200 Sobic006G128900 Sobic006G128900 Sobic005G015100--Sobic006G128900 Sobic006G145000 Sobic006G145000 Sobic005G015100--Sobic006G145000 Sobic002G421700 Sobic002G421700 Sobic005G015100--Sobic002G421700 Sobic004G271900 Sobic004G271900 Sobic005G015100--Sobic004G271900 Sobic004G256600 Sobic004G256600 Sobic005G015100--Sobic004G256600 Sobic006G009400 Sobic006G009400 Sobic002G051450--Sobic006G009400 Sobic006G262200 Sobic006G262200 Sobic002G051450--Sobic006G262200 Sobic002G051450--Sobic005G015100 Sobic010G263800 Sobic010G263800 Sobic002G051450--Sobic010G263800 Sobic002G051450--Sobic008G034600 Sobic002G051450--Sobic004G256600 Sobic009G045700 Sobic009G045700 Sobic002G051450--Sobic009G045700 Sobic009G004700 Sobic009G004700 Sobic002G051450--Sobic009G004700 Sobic005G077400 Sobic005G077400 Sobic002G051450--Sobic005G077400 Sobic007G205800 Sobic007G205800 Sobic008G034600--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G034600--Sobic007G011400 Sobic008G034600--Sobic010G263800 Sobic008G034600--Sobic004G271900 Sobic008G117200 Sobic008G117200 Sobic008G034600--Sobic008G117200 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic003G401000 Sobic003G401000 Sobic002G158700--Sobic003G401000 Sobic002G158700--Sobic001G464200 Sobic001G167200 Sobic001G167200 Sobic002G158700--Sobic001G167200 Sobic004G031700 Sobic004G031700 Sobic002G158700--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic002G158700--Sobic003G445400 Sobic007G000800 Sobic007G000800 Sobic002G158700--Sobic007G000800 Sobic007G061700 Sobic007G061700 Sobic002G158700--Sobic007G061700 Sobic008G149800 Sobic008G149800 Sobic002G158700--Sobic008G149800 Sobic002G396000 Sobic002G396000 Sobic002G158700--Sobic002G396000 Sobic001G464200--Sobic002G158700 Sobic001G544200 Sobic001G544200 Sobic001G464200--Sobic001G544200 Sobic001G464200--Sobic004G031700 Sobic001G477800 Sobic001G477800 Sobic001G464200--Sobic001G477800 Sobic001G464200--Sobic006G128900 Sobic002G144966 Sobic002G144966 Sobic001G464200--Sobic002G144966 Sobic001G511500 Sobic001G511500 Sobic001G464200--Sobic001G511500 Sobic001G464200--Sobic010G263800 Sobic001G464200--Sobic003G445400 Sobic006G209850 Sobic006G209850 Sobic006G128900--Sobic006G209850 Sobic006G128900--Sobic001G511500 Sobic006G128900--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic006G128900--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic006G128900--Sobic001G090400 Sobic006G128900--Sobic003G445400 Sobic003G268300 Sobic003G268300 Sobic006G128900--Sobic003G268300 Sobic006G128900--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic006G128900--Sobic002G157000 Sobic009G040700 Sobic009G040700 Sobic006G145000--Sobic009G040700 Sobic005G077466 Sobic005G077466 Sobic006G145000--Sobic005G077466 Sobic001G094000 Sobic001G094000 Sobic006G145000--Sobic001G094000 Sobic004G357200 Sobic004G357200 Sobic006G145000--Sobic004G357200 Sobic006G246900 Sobic006G246900 Sobic006G145000--Sobic006G246900 Sobic006G145000--Sobic007G011400 Sobic006G145000--Sobic006G009400 Sobic006G145000--Sobic007G205800 Sobic006G145000--Sobic006G128900 Sobic002G421700--Sobic008G034600 Sobic002G421700--Sobic008G117200 Sobic001G454301 Sobic001G454301 Sobic002G421700--Sobic001G454301 Sobic002G061400 Sobic002G061400 Sobic002G421700--Sobic002G061400 Sobic005G015900 Sobic005G015900 Sobic002G421700--Sobic005G015900 Sobic008G129700 Sobic008G129700 Sobic002G421700--Sobic008G129700 Sobic007G116400 Sobic007G116400 Sobic002G421700--Sobic007G116400 Sobic002G421700--Sobic001G094000 Sobic006G217200 Sobic006G217200 Sobic002G421700--Sobic006G217200 Sobic009G117400 Sobic009G117400 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic004G271900--Sobic008G034600 Sobic004G271900--Sobic010G263800 Sobic003G093600 Sobic003G093600 Sobic004G271900--Sobic003G093600 Sobic004G271900--Sobic004G256600 Sobic004G271900--Sobic007G011400 Sobic003G258400 Sobic003G258400 Sobic004G271900--Sobic003G258400 Sobic009G117300 Sobic009G117300 Sobic004G271900--Sobic009G117300 Sobic004G256600--Sobic003G258400 Sobic004G256600--Sobic004G271900 Sobic004G256600--Sobic010G263800 Sobic004G256600--Sobic009G040700 Sobic005G187200 Sobic005G187200 Sobic004G256600--Sobic005G187200 Sobic004G256600--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic004G256600--Sobic009G231300 Sobic004G256600--Sobic009G117400 Sobic002G077200 Sobic002G077200 Sobic004G256600--Sobic002G077200
Octagon: transcription factors


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