Gene annotation
Transcriptome id Sobic.001G106100.4,Sobic.001G106100.3,Sobic.001G106100.2
Synonym Sb01g009470
Functional annotation expressed protein
UniProt A0A1Z5S5N5 , A0A1B6QIC2
Pfam -
Panther DB PTHR36409 PTHR36409:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66290 : -
RAP-DB (Rice) LOC_Os03g51700.1 : expressed protein
MaizeGDB (Corn) Zm00025a007980
Brachypodium KQK13421 , KQK13420
Barley HORVU4Hr1G009760.8 , HORVU4Hr1G009760.9 , HORVU4Hr1G009760.1 , HORVU4Hr1G009760.2 , HORVU4Hr1G009760.3 , HORVU4Hr1G009760.4 , HORVU4Hr1G009760.5 , HORVU4Hr1G009760.6 , HORVU4Hr1G009760.7
Wheat -
Populus -


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cDNA sequences
Sobic.001G106100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
2 Sobic.008G173400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
3 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
4 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
5 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
6 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
7 Sobic.003G074400 expressed protein -
8 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
9 Sobic.007G189000 WTG1(Ortholog in rice:Wang et al. (2017))(PubMedID : 31659909)@ubiquitin thioesterase otubain-like, putative, expressed K09602: ubiquitin thioesterase protein OTUB1
10 Sobic.003G417900 cullin-1, putative, expressed -
11 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
12 Sobic.010G266500 BRE, putative, expressed K12173: BRE, BRCA1-A complex subunit BRE
13 Sobic.001G066300 cell cycle control protein, putative, expressed -
14 Sobic.002G299100 SET domain containing protein, expressed -
15 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
16 Sobic.009G160600 Yip1 domain containing protein, expressed -
17 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
18 Sobic.002G260400 - -
19 Sobic.004G111700 tyrosine-protein phosphatase YVH1, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
20 Sobic.007G041500 diacylglycerol kinase, putative, expressed -


Gene co-expression network
sample Sobic001G106100 Sobic001G106100 Sobic006G215900 Sobic006G215900 Sobic001G106100--Sobic006G215900 Sobic008G173400 Sobic008G173400 Sobic001G106100--Sobic008G173400 Sobic001G042200 Sobic001G042200 Sobic001G106100--Sobic001G042200 Sobic008G058800 Sobic008G058800 Sobic001G106100--Sobic008G058800 Sobic004G246100 Sobic004G246100 Sobic001G106100--Sobic004G246100 Sobic002G197100 Sobic002G197100 Sobic001G106100--Sobic002G197100 Sobic003G074400 Sobic003G074400 Sobic001G106100--Sobic003G074400 Sobic007G056500 Sobic007G056500 Sobic001G106100--Sobic007G056500 Sobic007G189000 Sobic007G189000 Sobic001G106100--Sobic007G189000 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic010G243400 Sobic010G243400 Sobic008G173400--Sobic010G243400 Sobic008G173400--Sobic004G067700 Sobic001G114000 Sobic001G114000 Sobic008G173400--Sobic001G114000 Sobic008G173400--Sobic001G106100 Sobic008G173400--Sobic002G197100 Sobic004G003401 Sobic004G003401 Sobic008G173400--Sobic004G003401 Sobic003G398400 Sobic003G398400 Sobic008G173400--Sobic003G398400 Sobic009G041700 Sobic009G041700 Sobic008G173400--Sobic009G041700 Sobic008G165000 Sobic008G165000 Sobic008G173400--Sobic008G165000 Sobic010G077500 Sobic010G077500 Sobic001G042200--Sobic010G077500 Sobic004G345400 Sobic004G345400 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic001G042200--Sobic008G058800 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic006G248500 Sobic006G248500 Sobic008G058800--Sobic006G248500 Sobic003G205501 Sobic003G205501 Sobic008G058800--Sobic003G205501 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic004G007300 Sobic004G007300 Sobic002G197100--Sobic004G007300 Sobic006G173100 Sobic006G173100 Sobic002G197100--Sobic006G173100 Sobic004G345700 Sobic004G345700 Sobic002G197100--Sobic004G345700 Sobic001G176200 Sobic001G176200 Sobic002G197100--Sobic001G176200 Sobic001G090400 Sobic001G090400 Sobic002G197100--Sobic001G090400 Sobic001G425000 Sobic001G425000 Sobic002G197100--Sobic001G425000 Sobic003G248500 Sobic003G248500 Sobic002G197100--Sobic003G248500 Sobic001G514000 Sobic001G514000 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900 Sobic007G075900 Sobic007G075900 Sobic003G074400--Sobic007G075900 Sobic004G353200 Sobic004G353200 Sobic003G074400--Sobic004G353200 Sobic009G058500 Sobic009G058500 Sobic003G074400--Sobic009G058500 Sobic002G010300 Sobic002G010300 Sobic003G074400--Sobic002G010300 Sobic001G360200 Sobic001G360200 Sobic003G074400--Sobic001G360200 Sobic004G274200 Sobic004G274200 Sobic003G074400--Sobic004G274200 Sobic002G299100 Sobic002G299100 Sobic003G074400--Sobic002G299100 Sobic006G200600 Sobic006G200600 Sobic003G074400--Sobic006G200600 Sobic002G378200 Sobic002G378200 Sobic003G074400--Sobic002G378200 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic002G034600 Sobic002G034600 Sobic007G056500--Sobic002G034600 Sobic007G056500--Sobic001G042200 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic007G056500--Sobic004G180900 Sobic001G395100 Sobic001G395100 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic006G121300 Sobic006G121300 Sobic007G056500--Sobic006G121300 Sobic007G189000--Sobic007G056500 Sobic007G105900 Sobic007G105900 Sobic007G189000--Sobic007G105900 Sobic009G124700 Sobic009G124700 Sobic007G189000--Sobic009G124700 Sobic001G169600 Sobic001G169600 Sobic007G189000--Sobic001G169600 Sobic007G189000--Sobic001G106100 Sobic002G347000 Sobic002G347000 Sobic007G189000--Sobic002G347000 Sobic006G219000 Sobic006G219000 Sobic007G189000--Sobic006G219000 Sobic009G224000 Sobic009G224000 Sobic007G189000--Sobic009G224000 Sobic009G160600 Sobic009G160600 Sobic007G189000--Sobic009G160600
Octagon: transcription factors


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