Gene annotation
Transcriptome id Sobic.010G245000.2,Sobic.010G245000.3,Sobic.010G245000.1
Synonym Sb10g028430
Functional annotation DTW domain containing protein, putative, expressed
UniProt A0A1W0VUM3 , A0A1W0VUN0 , A0A194YMA7
Pfam PF03942
Panther DB PTHR21392 PTHR21392:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03687 : DTW domain-containing protein
RAP-DB (Rice) LOC_Os06g23504.2 : DTW domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a041810
Brachypodium PNT75907 , PNT75906 , PNT75905 , KQK18314
Barley -
Wheat TraesCS7B02G245600 , TraesCS7A02G334000 , TraesCS7D02G341600 , TraesCS7D02G341600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G056701 - -
2 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
3 Sobic.004G345700 TBC domain containing protein, expressed -
4 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
5 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
6 Sobic.002G264200 RNA recognition motif containing protein, expressed -
7 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
8 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
9 Sobic.002G260400 - -
10 Sobic.003G289400 farnesyltransferase subunit beta, putative, expressed K05954: protein farnesyltransferase subunit beta
11 Sobic.002G310200 expressed protein -
12 Sobic.003G205501 - -
13 Sobic.007G000800 expressed protein -
14 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
15 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
16 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
17 Sobic.001G515000 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed K00587: ICMT, protein-S-isoprenylcysteine O-methyltransferase
18 Sobic.008G153000 MATH domain containing protein, expressed -
19 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
20 Sobic.005G013200 BAH domain containing protein, expressed -


Gene co-expression network
sample Sobic010G245000 Sobic010G245000 Sobic002G056701 Sobic002G056701 Sobic010G245000--Sobic002G056701 Sobic001G176200 Sobic001G176200 Sobic010G245000--Sobic001G176200 Sobic004G345700 Sobic004G345700 Sobic010G245000--Sobic004G345700 Sobic004G084300 Sobic004G084300 Sobic010G245000--Sobic004G084300 Sobic005G154500 Sobic005G154500 Sobic010G245000--Sobic005G154500 Sobic002G264200 Sobic002G264200 Sobic010G245000--Sobic002G264200 Sobic008G173100 Sobic008G173100 Sobic010G245000--Sobic008G173100 Sobic003G241200 Sobic003G241200 Sobic010G245000--Sobic003G241200 Sobic002G260400 Sobic002G260400 Sobic010G245000--Sobic002G260400 Sobic002G056701--Sobic010G245000 Sobic002G056701--Sobic002G260400 Sobic007G218000 Sobic007G218000 Sobic002G056701--Sobic007G218000 Sobic006G195700 Sobic006G195700 Sobic002G056701--Sobic006G195700 Sobic004G072100 Sobic004G072100 Sobic002G056701--Sobic004G072100 Sobic008G149800 Sobic008G149800 Sobic002G056701--Sobic008G149800 Sobic002G056701--Sobic008G173100 Sobic001G515000 Sobic001G515000 Sobic002G056701--Sobic001G515000 Sobic010G053800 Sobic010G053800 Sobic002G056701--Sobic010G053800 Sobic001G090400 Sobic001G090400 Sobic001G176200--Sobic001G090400 Sobic002G370900 Sobic002G370900 Sobic001G176200--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic001G176200--Sobic002G197100 Sobic001G176200--Sobic005G154500 Sobic005G015900 Sobic005G015900 Sobic001G176200--Sobic005G015900 Sobic001G176200--Sobic004G345700 Sobic006G173100 Sobic006G173100 Sobic001G176200--Sobic006G173100 Sobic001G176200--Sobic010G245000 Sobic002G320500 Sobic002G320500 Sobic001G176200--Sobic002G320500 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G007300 Sobic004G007300 Sobic004G345700--Sobic004G007300 Sobic001G408700 Sobic001G408700 Sobic004G345700--Sobic001G408700 Sobic004G345700--Sobic005G154500 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic004G345700--Sobic010G245000 Sobic008G047800 Sobic008G047800 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic005G154500--Sobic001G176200 Sobic005G154500--Sobic004G345700 Sobic005G154500--Sobic003G241200 Sobic005G154500--Sobic010G245000 Sobic005G154500--Sobic008G149800 Sobic005G154500--Sobic008G173100 Sobic005G154500--Sobic005G015900 Sobic002G357700 Sobic002G357700 Sobic005G154500--Sobic002G357700 Sobic006G116100 Sobic006G116100 Sobic005G154500--Sobic006G116100 Sobic010G069100 Sobic010G069100 Sobic002G264200--Sobic010G069100 Sobic003G416700 Sobic003G416700 Sobic002G264200--Sobic003G416700 Sobic001G461400 Sobic001G461400 Sobic002G264200--Sobic001G461400 Sobic008G153000 Sobic008G153000 Sobic002G264200--Sobic008G153000 Sobic002G264200--Sobic010G236400 Sobic002G071500 Sobic002G071500 Sobic002G264200--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic002G264200--Sobic007G065400 Sobic002G153700 Sobic002G153700 Sobic002G264200--Sobic002G153700 Sobic006G118700 Sobic006G118700 Sobic002G264200--Sobic006G118700 Sobic008G173100--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic008G173100--Sobic007G090430 Sobic008G173100--Sobic006G116100 Sobic002G063900 Sobic002G063900 Sobic008G173100--Sobic002G063900 Sobic008G173100--Sobic002G264200 Sobic008G173100--Sobic010G236400 Sobic008G173100--Sobic008G153000 Sobic001G311500 Sobic001G311500 Sobic008G173100--Sobic001G311500 Sobic008G173100--Sobic010G245000 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000 Sobic002G260400--Sobic008G173100 Sobic002G260400--Sobic002G056701 Sobic002G260400--Sobic002G063900 Sobic002G260400--Sobic002G370900 Sobic002G260400--Sobic006G116100 Sobic002G260400--Sobic008G153000 Sobic002G260400--Sobic010G236400 Sobic002G083500 Sobic002G083500 Sobic002G260400--Sobic002G083500 Sobic002G260400--Sobic010G245000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.