Gene annotation
Transcriptome id Sobic.001G176200.1
Synonym Sb01g015320
Functional annotation FHA domain containing protein, putative, expressed
UniProt C5WTB4
Pfam PF00498
Panther DB PTHR23308 PTHR23308:SF33
NCBI CDD KOG1880; Nuclear inhibitor of phosphatase-1
KEGG Orthology K13216; PPP1R8, nuclear inhibitor of protein phosphatase 1
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G47790 : SMAD/FHA domain-containing protein
RAP-DB (Rice) LOC_Os08g23680.1 : FHA domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017340 , Zm00025a007182
Brachypodium KQJ96050 , KQJ96054 , KQJ96047 , KQJ96049 , KQJ96048
Barley HORVU1Hr1G002510.3 , HORVU1Hr1G002510.2 , HORVU1Hr1G002510.1 , HORVU1Hr1G002510.6 , HORVU1Hr1G002510.5 , HORVU1Hr1G002510.4
Wheat TraesCS1D02G018400 , TraesCS1A02G019200 , TraesCS1B02G022900
Populus -


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cDNA sequences
Sobic.001G176200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
2 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
3 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
4 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
5 Sobic.005G015900 dnaJ domain containing protein, expressed -
6 Sobic.004G345700 TBC domain containing protein, expressed -
7 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
8 Sobic.010G245000 DTW domain containing protein, putative, expressed -
9 Sobic.002G320500 MYB family transcription factor, putative, expressed -
10 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
11 Sobic.001G425000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
12 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
13 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
14 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
15 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
16 Sobic.005G013200 BAH domain containing protein, expressed -
17 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
18 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
19 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
20 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit


Gene co-expression network
sample Sobic001G176200 Sobic001G176200 Sobic001G090400 Sobic001G090400 Sobic001G176200--Sobic001G090400 Sobic002G370900 Sobic002G370900 Sobic001G176200--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic001G176200--Sobic002G197100 Sobic005G154500 Sobic005G154500 Sobic001G176200--Sobic005G154500 Sobic005G015900 Sobic005G015900 Sobic001G176200--Sobic005G015900 Sobic004G345700 Sobic004G345700 Sobic001G176200--Sobic004G345700 Sobic006G173100 Sobic006G173100 Sobic001G176200--Sobic006G173100 Sobic010G245000 Sobic010G245000 Sobic001G176200--Sobic010G245000 Sobic002G320500 Sobic002G320500 Sobic001G176200--Sobic002G320500 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic009G000500 Sobic009G000500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic002G370900--Sobic001G176200 Sobic006G082900 Sobic006G082900 Sobic002G370900--Sobic006G082900 Sobic004G067700 Sobic004G067700 Sobic002G370900--Sobic004G067700 Sobic002G370900--Sobic006G173100 Sobic003G008500 Sobic003G008500 Sobic002G370900--Sobic003G008500 Sobic002G260400 Sobic002G260400 Sobic002G370900--Sobic002G260400 Sobic002G310200 Sobic002G310200 Sobic002G370900--Sobic002G310200 Sobic002G370900--Sobic002G197100 Sobic002G370900--Sobic004G345700 Sobic004G007300 Sobic004G007300 Sobic002G197100--Sobic004G007300 Sobic002G197100--Sobic006G173100 Sobic002G197100--Sobic004G345700 Sobic002G197100--Sobic001G176200 Sobic002G197100--Sobic001G090400 Sobic001G425000 Sobic001G425000 Sobic002G197100--Sobic001G425000 Sobic003G248500 Sobic003G248500 Sobic002G197100--Sobic003G248500 Sobic001G514000 Sobic001G514000 Sobic002G197100--Sobic001G514000 Sobic002G197100--Sobic002G370900 Sobic005G154500--Sobic001G176200 Sobic005G154500--Sobic004G345700 Sobic003G241200 Sobic003G241200 Sobic005G154500--Sobic003G241200 Sobic005G154500--Sobic010G245000 Sobic008G149800 Sobic008G149800 Sobic005G154500--Sobic008G149800 Sobic008G173100 Sobic008G173100 Sobic005G154500--Sobic008G173100 Sobic005G154500--Sobic005G015900 Sobic002G357700 Sobic002G357700 Sobic005G154500--Sobic002G357700 Sobic006G116100 Sobic006G116100 Sobic005G154500--Sobic006G116100 Sobic006G032400 Sobic006G032400 Sobic005G015900--Sobic006G032400 Sobic004G031700 Sobic004G031700 Sobic005G015900--Sobic004G031700 Sobic004G219100 Sobic004G219100 Sobic005G015900--Sobic004G219100 Sobic005G015900--Sobic001G176200 Sobic005G015900--Sobic002G320500 Sobic005G015900--Sobic001G090400 Sobic002G158700 Sobic002G158700 Sobic005G015900--Sobic002G158700 Sobic001G303675 Sobic001G303675 Sobic005G015900--Sobic001G303675 Sobic003G445400 Sobic003G445400 Sobic005G015900--Sobic003G445400 Sobic004G345700--Sobic002G197100 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic001G408700 Sobic001G408700 Sobic004G345700--Sobic001G408700 Sobic004G345700--Sobic005G154500 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic004G345700--Sobic010G245000 Sobic006G173100--Sobic001G090400 Sobic006G173100--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic006G173100--Sobic003G187400 Sobic006G173100--Sobic002G197100 Sobic004G021100 Sobic004G021100 Sobic006G173100--Sobic004G021100 Sobic006G173100--Sobic006G032400 Sobic001G512700 Sobic001G512700 Sobic006G173100--Sobic001G512700 Sobic006G173100--Sobic004G067700 Sobic006G173100--Sobic002G370900 Sobic002G056701 Sobic002G056701 Sobic010G245000--Sobic002G056701 Sobic010G245000--Sobic001G176200 Sobic010G245000--Sobic004G345700 Sobic004G084300 Sobic004G084300 Sobic010G245000--Sobic004G084300 Sobic010G245000--Sobic005G154500 Sobic002G264200 Sobic002G264200 Sobic010G245000--Sobic002G264200 Sobic010G245000--Sobic008G173100 Sobic010G245000--Sobic003G241200 Sobic010G245000--Sobic002G260400 Sobic002G157000 Sobic002G157000 Sobic002G320500--Sobic002G157000 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic002G320500--Sobic006G032400 Sobic002G320500--Sobic009G000500 Sobic002G320500--Sobic001G090400
Octagon: transcription factors


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